Rhizobium ruizarguesonis: J3P73_35785
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Entry
J3P73_35785 CDS
T07270
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J3P73_35785 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rrg03000
]
J3P73_35785 (nifA)
Transcription factors [BR:
rrg03000
]
Prokaryotic type
Helix-turn-helix
Other families
J3P73_35785 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
DUF3369
AAA
Mg_chelatase
GAF
AAA_3
AAA_16
IstB_IS21
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QSZ05894
LinkDB
All DBs
Position
p4:complement(311906..313465)
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AA seq
519 aa
AA seq
DB search
MIKPEARLHILYDISKELISSFPLDNLLKAAMNALVEHLRLRDGGIVIHGSGGEPWINVR
APIGDDVRSRSLTIEQADAIDRVIASGEKHFGKNSVVLPVKVNRKAIGALWIDFAQKSGD
QDETLLAMIAVLIGLTCQRDRELCSDGGAVAEEQQAGQIPKIKPKPHPTQLDKIDWIVGE
SPAIKRVLATTNIVAATNSAVLLRGESGTGKECFARAIHALSIRKSKAFIKLNCAALSET
VLESELFGHEKGAFTGALLQRAGRFELANGGTLLLDEIGDVSPQFQAKLLRVLQEGEFER
LGGTKTLKVDVRVICATNKNLEVAVLRGEFRADLYYRINVVPIILPPLRQRDGDISLLAQ
VFLEQFNKANDRNCDFAPSAIDILSKCAFPGNVRELDNCVQRTATLASSNTITSSDFACQ
QDQCSSALLWKDARDGTGNGPVHSLNPRDTMLGGLGANVGTPSGAAATIEAAGLTERDRL
INAMVKAGWVQAKAARILGKTPRQVGYALRRHRIDVKKD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaccagaggcgcggctccatattctctacgacatctccaaagagcttatctct
tcttttcctctagacaacttgctgaaggctgccatgaacgccctcgtcgagcatctgcga
ttgcgcgatggcggaatcgtgattcacggctcgggaggagagccttggataaacgtacgg
gctcccattggggacgacgttcgctcacgttctctgacgattgaacaggcggacgcaata
gatcgtgtcatcgctagcggtgagaagcactttgggaaaaattctgtcgttctccccgtt
aaagtaaaccggaaagcaatcggcgcattgtggattgatttcgcgcagaaaagcggagat
caggacgaaacccttctggcaatgattgccgtcctgatcggcttaacctgccagcgcgat
cgcgaattgtgcagcgatggcggcgcagtcgccgaggaacaacaagcaggacagattccg
aaaatcaaaccgaagcctcatcccacccaactcgataaaatcgactggatcgttggggag
agccccgcgatcaagagggtattagctaccaccaatatcgtggccgcgacgaactccgcg
gtgctcttgagaggagagagcggcactggcaaggaatgctttgctagagcaatacacgca
ttatcgatacggaaaagcaaggcgtttattaagttgaattgcgctgcgctgtcggaaacc
gttctggaatccgaattgtttggccatgagaagggcgctttcactggcgctctccttcaa
cgagctggacgtttcgaactggccaatggcggaacgctgttgcttgatgaaattggcgat
gtatcaccacaattccaggcgaagttattgcgcgtgttacaggaaggcgaattcgaacgt
ctcggcggaacgaagacattgaaagtagacgttcgagttatatgcgccaccaacaaaaac
cttgaagtggccgtccttcgaggggagttcagagccgacctctattaccggatcaatgtg
gtgccgatcattttgccgccacttcggcagcgcgacggagacatttcgcttctagcgcaa
gtgttcctcgagcaattcaacaaggcaaatgatcgaaattgcgacttcgccccgtcggcc
atagacattttgtcgaaatgcgccttccccggcaatgttcgcgagctggacaactgcgtt
caaaggaccgccactctcgccagttcaaataccatcacttcatcggattttgcctgtcag
caagaccagtgttcttcggcgctcctctggaaagacgcccgcgacggcactggcaacggc
ccggtgcatagtctcaacccgcgagatacaatgttaggcggactgggggccaacgtaggc
actcccagcggtgccgcagccacaatcgaggcagcgggtctcactgagcgtgatcggctg
atcaatgcaatggtgaaggctggctgggtacaggccaaagcggctcgtatcctgggtaag
acgccgcggcaggtcggctatgcgctacgccggcatcgtatcgatgtgaagaaagactaa
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