Rhizobium rhododendri: PR018_08080
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Entry
PR018_08080 CDS
T08971
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
rrho
Rhizobium rhododendri
Pathway
rrho02024
Quorum sensing
rrho03060
Protein export
rrho03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PR018_08080 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PR018_08080 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PR018_08080 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rrho02044
]
PR018_08080 (secDF)
Secretion system [BR:
rrho02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PR018_08080 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
SecD_1st
Sec_GG
MMPL
SecD-TM1
Motif
Other DBs
NCBI-ProteinID:
WFS24439
LinkDB
All DBs
Position
complement(1634881..1637430)
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AA seq
849 aa
AA seq
DB search
MLQFSRWKTILVWLAVVASVLVALPNLFSDRQLERFPSWLPHHKAILGLDLQGGSRISLK
IERDEIVAARLQSTINDVARRLRDAKIPTVDLSGTVQTITMHLTDVGQMAAATDALKPLT
DSVGSSATGGSIREATVVPGDGGLITMALTNEGIAYRTAEALDQSIEVVRSRVKQVGRRE
PLIQRQGSDRLIVEVPGLTDPQRLKTLLNQPAKLTFNMLDTSMPVQTAIDTQPPANSEVL
YSQDDPPDSYLVFKRPVANDQSIIAAEPMLDTQTKQNVVTFQLDAKATQAFAQATAKNVG
KSYVAVLDDQVISAPLIKQPVTDGKGMLAGNFSPEGAADLVILLRSGSLPATLTVVEERT
VEPGLGADSTRASIIAGIVGAFAVVAFMVFFYGSLGGFATAALVFNIILIMAILSLFQAT
LTLPGIAGIIFTMGLAVDSNVLIYERIREKLKGGTPFVQACESGFARAYTTIIDANVTTL
IAAAILFSMGSGPVRGFAVTLGIGIIASLFTAFTLTRWLIAIWIKRRRPKHLPKGVRTAV
FDGANIRFMGIRRYTFTISAVLSVLSMIGFFSFGMHLGVDFTGGSLIEVRAKQGKVDIPD
IKTRLGQLNIGDVQAQPISNATGALIRLQSQDGGENAEQSAVTLVRGELQDKYEFRRVEV
VGPAISGQLTRAGTFGVMASLAAIFIYIWVRFAWQYALGAIIATLHDIILTFGLFVVTGI
EFNLTSIAAVLTIIGYSLNDTVVVYDRMRENLRHYKQMPLPILIDASINQTLSRTVLTAA
TTLLALLALSIFGGEVIRSFTFVMFFGVAVGTFSSIYIAAPVLIAFKLRPRGVQPGPQPD
VPPAGKAVA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaattctcccgctggaagacaatcctcgtttggcttgccgttgttgccagcgtc
ctcgtcgcacttcccaacctgttcagcgaccgccagctcgagcgtttcccgagctggctg
ccgcaccacaaagcgatcctcggtctcgacctccagggcggatcgcggatctcgctgaag
atcgagcgcgacgagatcgtcgcagcccggctgcaatcaacgatcaacgatgtcgcgcgc
cggctgcgtgatgcgaaaattcccaccgtcgatctttccggtaccgtccagaccatcacc
atgcacctgaccgacgtcggccagatggcggcggcaaccgatgcactcaagcctttaacc
gacagcgtcggaagctcggccaccggcggttcgatccgcgaggcgaccgtcgtccccggc
gatggcggcctgataaccatggcactgaccaacgagggtatcgcctaccgtaccgcggag
gcgctggaccagtcgatcgaagtggttcgcagccgcgtcaagcaggtcggccgccgcgag
ccgctgatccagcggcagggcagcgaccggctcatcgtcgaggtgccgggcctgaccgat
ccccagcggctgaagacgctgctgaaccagccggcgaagctgaccttcaacatgctggat
acgagcatgccggtgcagacggcgatcgacacgcagccaccggccaattccgaagtgctg
tattcgcaggacgatccgccggatagctacctcgtcttcaagcggcccgtggccaacgac
cagagcatcatcgccgccgagccgatgctggatacccagaccaagcagaacgtcgttacc
ttccagctcgatgcaaaggccacccaggcattcgcgcaggcgacggcgaagaacgtcggc
aagtcctacgtcgccgtactcgacgaccaggtgatctcggcaccgctgatcaaacagccc
gtgaccgatggcaagggtatgctggcaggcaacttttcgccagagggggctgccgacctc
gtcatccttctgcgctccggctcgttgccggcaacgctgacggtggtcgaggagcgtacc
gtcgagcccggccttggcgccgattcgacccgtgcgagcatcatcgccggcatcgtcggt
gcctttgccgtggttgccttcatggtgttcttctatggttcgctcggcggtttcgccacc
gcggcgctggttttcaacatcattctcatcatggcgatcctcagccttttccaggcgacg
ctgaccttgccaggtatcgccggcatcatcttcacgatgggcctggcggtggattcgaac
gtgctgatctatgagcgtatccgcgaaaagctgaagggtgggacgccgttcgtgcaggct
tgcgaaagcggatttgcgcgcgcctacacgaccatcatcgacgccaatgtgacgacgctg
atcgccgctgccatcctgttctccatggggagcggtcccgtgcgcggctttgccgtgaca
ctcgggatcggcatcatcgcatcgctgtttacggctttcacgctgacccgctggctgatt
gccatctggatcaagcgccgccggccgaagcatttgccgaagggcgtgcggactgccgtc
ttcgacggcgccaatattcgcttcatgggcatccgccgctatactttcacgatctcggcc
gtgctttcggtgctgtcgatgattggtttcttctcgttcggcatgcatctcggtgtcgat
ttcaccggcggctcgctgatcgaggttcgtgccaagcagggcaaggtcgatatcccggat
atcaagacgcggctcgggcagctgaatatcggcgatgtccaggcgcagccgatcagcaat
gcgaccggtgcgctgatccgcctgcagtcgcaggatggcggcgaaaatgccgagcagtcg
gcggtaacgctggtgcgtggcgaattgcaggacaagtacgagttccgccgcgtcgaggtc
gtgggtccggcgatatcgggccaactgacgcgggcgggtacgtttggcgtgatggcctcc
ctggcggcgatcttcatctatatctgggtgcggtttgcctggcagtatgcgctgggggcg
atcatcgcgacgctgcacgatatcatcctgaccttcggcctgttcgttgtcaccggtatc
gaattcaacctgacgagcatcgcggcggtgctgacgatcatcggctattcgctcaacgat
accgtcgtcgtctacgaccggatgcgtgaaaacctcaggcactacaagcagatgccgttg
ccgatcctcatcgatgcgtcgatcaaccagaccctgtcgcgtaccgtgctgacggcggca
accacattgctggcgctgctggcgctgtcgatcttcggcggcgaggtcatccgctcgttc
acgttcgtgatgttcttcggcgttgcggtcggcaccttctcgtcgatctacatcgccgca
ccggtgctgatcgccttcaagcttcggccgcgcggggtgcagcccggtccgcagccggat
gtgccgccagccggcaaggcggtggcctga
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