Rhizobium rhododendri: PR018_22885
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Entry
PR018_22885 CDS
T08971
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00521
Streptomycin biosynthesis
rrho00523
Polyketide sugar unit biosynthesis
rrho00541
O-Antigen nucleotide sugar biosynthesis
rrho01100
Metabolic pathways
rrho01110
Biosynthesis of secondary metabolites
rrho01250
Biosynthesis of nucleotide sugars
Module
rrho_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PR018_22885 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PR018_22885 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PR018_22885 (rfbC)
Enzymes [BR:
rrho01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PR018_22885 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WFS26057
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Position
unnamed1:1115591..1116157
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AA seq
188 aa
AA seq
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MKIDRLPLAGLTKITPNRLGDHRGYFSETFKEGWFRENVADVTFVQENESLSASVGTVRG
LHFQLEPFAQGKLVRCIAGRIFDVAVDIRVGSATYGQWYGLELSKENGEQLWIPAGFAHG
FATLVPDCVISYKVTAPYSAQNDRGLLWNDPSIGIAWPLPLQDAILSNKDKEQPTLAELP
AYFQMINE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaccgattgccgcttgccggcctcacaaaaattacccctaacagacttggt
gatcatcgcgggtacttttccgagacgttcaaggagggttggttccgcgagaatgtggcc
gacgtcacatttgtacaggaaaacgagtctctctcggcttcggtcggaacggtgcgtggg
ttgcacttccagctggagccatttgcgcaaggtaaattggtgcggtgtatcgcaggaagg
atcttcgatgtcgccgtcgatatccgcgtgggatcggcaacctacggacaatggtacggg
ctcgaactctcaaaggaaaacggcgagcagctctggatcccggcaggatttgcccacggc
tttgcgaccctggttcccgattgcgtgatctcatacaaggtgacagcgccctacagcgcg
cagaacgaccgcggccttctgtggaacgatccaagcatcggtatcgcgtggccgctgccg
ctccaggacgccatcctgtccaacaaggacaaggaacagccgactttggcggagctgccc
gcatactttcagatgatcaacgaataa
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