Rhinopithecus roxellana (golden snub-nosed monkey): 104654780
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Entry
104654780 CDS
T03989
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104654780 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rro03041
]
104654780 (DHX38)
Enzymes [BR:
rro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104654780 (DHX38)
Spliceosome [BR:
rro03041
]
Complex C
Other components
Step II factors
104654780 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
104654780
NCBI-ProteinID:
XP_010352380
UniProt:
A0A2K6NVZ6
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All DBs
Position
20:65782100..65801354
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AA seq
1227 aa
AA seq
DB search
MGDTSEDASIHRLEGTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSKISSYKDWEESKDDQKDAEEEGGDQAGRNIRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDWKKEKSRDRDYDRKRDRDDRDRSRHSS
RSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWESPSPTPSYR
DSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREEG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKAVTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN
NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVR
STKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaccagtgaggatgcctcgatccatcgattggaaggcactgatctggactct
caggttggtggtcttatttgcaagaccaaaagtgcggccagcgagcagcatgtcttcaag
gcccctgctccccgcccttcattactgggactggacttgctggcttccctgaaacggagg
gagcgagaggagaaggacgatggggaggacaagaagaagtccaaaatctcttcctacaag
gactgggaagagagtaaggatgaccagaaggatgccgaggaagagggcggtgaccaggct
ggccgaaatatccggaaagacagacattatcgatctgctcgggtagaaactccatcccat
ccagggggtgtgagcgaagagttttgggaacgcagtcggcagagagagcgggagcggcgc
gaacatggtgtctatgcctcatccaaagaagaaaaggattggaagaaggagaaatcgcgg
gatcgagactatgaccgcaagagggacagagatgaccgggatagaagtaggcacagcagc
agatcggagcgagatggagggtcagagcgtagcagcagaagaaatgagcctgagagccca
cgacatcgacctaaagatgcagccaccccttcaaggtctacctgggaggaagaggacagt
ggctatggctcctcaaggcgctcccagtgggaatcgccctccccgacgccttcctatcgg
gattctgagcggagccatcggctgtccactcgagatcgagacaggtctgtgaggggcaag
tactcggatgacacgcctctgccaactccctcctacaaatacaatgagtgggccgatgac
agaagacacttggggtccaccccacgtctgtccaggggtcgaggaaggcgcgaggaaggc
gaagaaggaatttcatttgacacggaggaggagcggcagcagtgggaggatgaccagagg
caagccgatcgggattggtacatgatggacgagggctatgatgagttccacaacccactg
gcctactcctctgaggactatgtgaggaggcgggagcagcacctgcataaacagaagcag
aagcgcatttcagctcagcggagacagatcaatgaggataacgagcgctgggagacaaac
cgcatgctcaccagtggggtggtccatcggctggaggtggacgaggattttgaagaggac
aatgcagccaaggtgcatctgatggtgcacaatctggtgcctccctttctggatgggcgc
attgtcttcaccaagcagccggagccggtgatcccagtgaaggacgccacttctgacctg
gccatcattgctcggaaaggcagccaaacagtgcggaagcacagggagcagaaggagcgc
aagaaggctcagcacaaacactgggaactggctgggaccaaactgggagatataatgggt
gtcaagaaggaggaagaaccagataaagctgtgacggaggatgggaaggtggactacagg
acagagcagaagtttgcagatcacatgaagaaaaagagtgaagccagcagtgaatttgca
aagaagaagtccatcctggagcagaggcagtacctgcccatctttgcagtgcagcaggag
ctgctcactattatcagagacaacagcatcgtgatcgtggttggggagacagggagtggt
aagaccactcagctgacacagtacctgcatgaagatggttacacagactatgggatgatt
gggtgtacccagccccggcgtgtagctgccatgtcagtggccaagagagtcagtgaagag
atggggggcaaccttggtgaggaggtgggctatgccatccgctttgaagactgcacttca
gagaacaccttgatcaaatacatgactgatgggatcctgctccgagagtccctccgggaa
gccgacctggatcactacagcgccatcatcatggatgaggcccacgagcgctccctcaac
actgacgtgctcttcgggctgctccgggaggtggtggctcggcgctcagacctgaagctc
atcgtcacatcagccacgatggatgcagagaagtttgctgccttttttgggaatgtcccc
atcttccacatccctggccgtaccttccctgttgacattctcttcagcaagaccccacag
gaggattacgtggaggctgcagtgaagcagtccttgcaggtacacctgtcgggggcccct
ggggacatccttatcttcatgcctggccaggaggacattgaggtgacctcagaccagatt
gtggagcatctggaggaactggagaatgcacctgccctagccgtgctgcccatctactct
cagctgccttctgacctccaggccaaaatcttccagaaggctccagatggcgttcggaag
tgcattgttgccaccaacattgccgagacgtctctgactgttgatggcatcatgtttgtt
atcgattctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctg
cagatctatcccattagccaggccaatgccaaccagcggtcagggcgagccggcaggacg
ggcccaggtcagtgtttcaggctctacacccagagcgcctacaagaatgagctcctgacc
accacagtgcccgagatccagaggaccaacctggccaacgtggtgctgctgctcaagtcc
cttggggtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatg
ctcaactctatgtatcagctctggatcctcggggccctggacaacacaggtggtctgacc
tctaccgggcggttgatggtggagttcccgctggaccctgccctgtccaagatgctcatc
gtgtcctgtgacatgggctgcagttccgagatcttgctcatcgtctccatgctctccgtc
ccggccatcttctacaggcccaagggtcgagaggaggagagtgatcaaatccgggagaag
ttcgctgtccccgagagcgatcatttgacctacctgaatgtctacctgcagtggaagaac
aataattactctaccatctggtgtaacgatcatttcatccatgctaaggccatgcggaag
gtccgggaggtgcgagctcaactcaaggacatcatggtgcagcagcggatgagcctggcc
tcatgtggcactgactgggacatcgtcaggaagtgcatctgtgctgcctatttccaccaa
gcagccaagctcaagggaatcggggagtacgtgaacatccgcacagggatgccctgccac
ttgcaccccaccagctccctttttggaatgggctacaccccggattacatagtgtatcac
gagttggtcatgaccaccaaggagtacatgcagtgcgtgaccgctgtggacggggagtgg
ctggcagagctgggccccatgttctatagcgtgaaacaggcgggcaagtcacggcaggag
aaccgtcgtcgggccaaagaggaagcctctgccatggaggaggagatggcgctggccgag
gaacagctgcgagcacggcggcaggagcaggagaagcgcagccccctgggcagtgtcaga
tctacgaagatctacactccaggccggaaagagcaaggggagcctatgacccctcgccgc
acgccagcccgctttggtctgtga
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integrated database retrieval system
