Rhinopithecus roxellana (golden snub-nosed monkey): 104655804
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Entry
104655804 CDS
T03989
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03250
Viral life cycle - HIV-1
rro04623
Cytosolic DNA-sensing pathway
rro05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104655804 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104655804 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
104655804 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rro03400
]
104655804 (SAMHD1)
DNA repair and recombination proteins [BR:
rro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104655804 (SAMHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
HD_assoc_2
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
104655804
NCBI-ProteinID:
XP_010353620
UniProt:
A0A2K6PXI9
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All DBs
Position
13:complement(109297421..109372503)
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AA seq
628 aa
AA seq
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MQQADSDSDQPSKRPRCDDSPRTPSSTRSAEADWSPGLELHPDYKTWGPEQVCFFLRRGG
FEEPVLLKNIRENKITGALLPCLDESRFENLGISSLGERKKLLSYIQRLGQIHIDTMKVI
NDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCL
VRALGEKQPELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSV
MMFEHLINSNGIKPVMEHYGLIPEEDICFIKEQIVGPLESPVTHVLWPYKGRPERKSFLY
EIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVGNELRICARDKEVGN
LYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLKADDYIEITGAGGKKYHISTAIDDMEA
YTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQPTGQVKIKKEDYESLPK
EVAAAKPKELLEVKLEAEDFIVDVINMDYGMQEKNPIDHVSFYCKTDPNRPIRITKNQVS
QLLPEKFAEQLIRVYCKKMDRKSLYAAKQHFVQWCADRNFTKPQDGDVIAPLITPQKKEW
NYRTSVQSPTCLREASKSRLQLFKDDPR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagccgactccgactccgaccagccctccaagcggccccgttgcgatgacagc
ccgagaaccccctcaagcacccgttccgcagaggcagactggtccccgggcctggaactc
catcccgactacaagacatggggtccggagcaggtgtgcttcttcctcaggcgcggtggc
tttgaagagccagtgctgctgaagaacatccgagaaaacaaaatcacaggcgcattactg
ccctgtcttgatgagtctcgttttgaaaatcttggaataagttccttgggggagaggaag
aagctgcttagttatatccagcgattgggtcaaatccacattgatacaatgaaggttatt
aatgatcctatccatggccacattgagctccaccctctcctcgtccgcatcattgacaca
cctcaatttcaacgtcttcgatacatcaaacagctgggaggtggttactatgtttttcca
ggagcttcacacaatcgatttgagcatagtctaggggtggggtatctagcaggatgtcta
gttcgcgccctgggtgaaaaacaaccagagctgcagataagtgaacgagatattctctgt
gttcagattgctggactttgtcatgatctcggtcatgggccattttctcacatgtttgat
ggacgatttattccacttgctcgcccggaggtgaaatggacgcatgaacaaggctcagtt
atgatgtttgagcaccttattaattctaatggaatcaagcctgtcatggaacactatggt
ctcatccctgaagaagatatttgctttatcaaggaacaaattgtaggaccacttgaatca
cctgtcacacatgttttgtggccatataaagggcgtcctgaaaggaaaagcttcctttat
gagatagtgtctaataaaagaaatggcattgatgtggacaaatgggattattttgccagg
gactgccatcatcttggaatccaaaataattttgattacaagcgcttcattaagtttgcc
cgtgtctgtgaagtaggcaatgagttgcgtatttgtgctagagataaggaagttggaaat
ctgtatgacatgttccacactcgtaactctttacaccgtagagcttatcaacacaaagtt
ggcaacattattgatacaatgattacagatgctttcctcaaagcagacgactatatagag
attacaggtgctggaggaaaaaagtatcacatttctacagcaattgatgacatggaagcc
tatactaagctgacagataacatttttctggagattttatactctactgatcccaaattg
aaagatgcacgagagattttaaaacaaattgaataccgtaatctattcaagtatgtgggt
gagacccagccaacgggacaagtaaagattaaaaaggaggactatgaatctcttccaaaa
gaggttgctgctgctaaacccaaagaattgctggaagtaaaactggaggctgaagatttt
atagtggatgttatcaacatggattatggaatgcaagaaaagaatccaattgatcacgtt
agcttctattgtaagactgaccccaacagaccaatcaggattacgaaaaaccaggtttca
caacttctgccagagaaatttgcagagcagctgattcgagtatattgtaagaagatggac
agaaagagtttgtatgccgcaaaacaacactttgttcagtggtgcgcagacagaaatttc
accaagcctcaggatggcgatgttatagccccactcataacacctcagaaaaaggaatgg
aactacaggacttcagtccaaagtccaacttgcctccgagaagcatccaaaagcagactc
cagctttttaaagatgacccaaggtga
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