Roseiflexus sp. RS-1: RoseRS_3616
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Entry
RoseRS_3616 CDS
T00542
Name
(GenBank) glycoside hydrolase, family 20
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00511
Other glycan degradation
rrs00520
Amino sugar and nucleotide sugar metabolism
rrs00600
Sphingolipid metabolism
rrs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
RoseRS_3616
09103 Lipid metabolism
00600 Sphingolipid metabolism
RoseRS_3616
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RoseRS_3616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rrs03110
]
RoseRS_3616
Enzymes [BR:
rrs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
RoseRS_3616
Chaperones and folding catalysts [BR:
rrs03110
]
Intramolecular chaperones
Others
RoseRS_3616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20b
Glyco_hydro_20
Motif
Other DBs
NCBI-ProteinID:
ABQ91971
UniProt:
A5UZB8
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Position
complement(4516585..4518444)
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AA seq
619 aa
AA seq
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MDHLSLLPMPQSLTFLPGAYVASSARRILLQGTAPGALLFAARRLQSALRAHAGVEWELT
ATPEGPPGEIGATLRVIADSASHPQGYVLTIKDGGIIIEASAPAGIFYGVCTLIQIVEQT
GRTLPCLHISDYPDFAARGVMIDISRDKVPTMETLFMLVDMLAGWKINQVQLYTEHTFAY
RNHPDVWARASPMTGEEILTLDAYCKERHIDLVPNQNSFGHMHRWLIHPRYAALAETHDA
FQAPWGVMQGPFSLAPDDPGSLELVRSLYDELLPHFSSRLFNVGCDETVDLGQGRSKDIC
AQRGVGRVYLDFLLKLYDAVKQHGRTMMFWGDIVNNHPELIGELPRDVIALEWGYEADHP
FDRNCARYAEAGIPFYVCPGTSSWQSIAGRTDNALGNLHNAAEHGLKHGAIGYLITDWGD
MGHWQALPISFPGFAVGAAFAWAYAANRTINVPAAVSRHAFTDPTGAMGQVAYDLGNVYR
AVGYEPPNSSVLFWVLQAPDTDARNLPPLDFDRALDAIDAAIQPIATERMTRADAPLILQ
EFDNTVRLLRHACRLGQLLVQPDGPGALPRRRLLNNDMREIIREYERLWLARNRLGGLSD
SVARLERVRARYTSQEQHA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggatcatctctcgcttctcccgatgccgcagtcgctgacgttcttgccgggcgcctat
gttgccagttcggcgcgccgcatcctgttgcagggaacagcgccgggagcgctcctcttc
gcagcgcggcgtttgcagagcgcattacgcgcccacgctggcgtcgagtgggaactgacc
gccacacccgaaggaccgccgggcgaaatcggcgccacgctgcgggtgatcgctgatagc
gccagccatccgcaggggtacgtgcttacgatcaaggacggcggcatcattatcgaagcg
tcagcccccgctggcatcttctatggcgtctgcacgctgatccagatcgtcgagcagacc
ggtcgcacccttccctgcctgcacatcagcgactatcccgattttgccgcacgcggagtg
atgatcgatatcagccgcgataaagtcccaacaatggaaaccctgttcatgctggtcgat
atgctggcagggtggaagatcaaccaggtgcaactctacaccgagcataccttcgcgtat
cgcaatcaccccgatgtgtgggcgcgcgcatcgccgatgaccggcgaggaaatcctgacg
ctcgatgcgtactgcaaagaacgccatatcgacctggttcccaaccagaactcgtttggg
catatgcaccgctggttgatccatccgcgctatgccgcgctcgccgagacccacgacgca
ttccaggcgccctggggagtgatgcagggaccgttcagcctggcgccggacgatcccggc
agcctggaactggtgcgcagcctgtatgatgaactgctgccgcacttttcgagccggttg
ttcaacgtcggctgcgatgagacggtcgatcttggacagggacgcagtaaagacatctgt
gcacagcgtggcgtcggtcgggtctacctcgattttctgctcaaactctacgatgctgtg
aagcagcacgggcgcacgatgatgttctggggcgatattgtcaacaatcacccggaattg
atcggcgaactgccacgcgatgtaattgcgctcgaatggggatatgaagccgatcacccc
tttgatcgcaattgcgcgcgctatgccgaagcagggatccccttctatgtctgccccggc
acgtcgtcgtggcaaagcatcgccgggcgcaccgacaatgcgctgggcaatctgcacaat
gcagccgagcacgggttgaagcacggcgctatcggctatctgatcaccgattggggcgac
atggggcactggcaggcgctgccgatcagttttccgggattcgcggtcggcgcggcgttt
gcctgggcatacgctgcaaaccgcaccatcaatgttccggcagcggtcagccgccatgcg
ttcaccgacccgactggcgcgatgggacaggttgcatacgacctggggaatgtgtatcgc
gccgtcggctacgagccgcccaactcgtcggtgctgttctgggtgttgcaggcgccggac
accgatgcgcgcaacctgccgccgctcgacttcgaccgcgcgctcgatgcgatcgatgct
gcaatccagccgattgccacagaacgcatgacgcgcgccgatgccccgctcatcctgcaa
gagttcgataacacggtgcgattactgcgccacgcctgccgtctgggacagttgctggtt
caacccgatggacccggcgcgttgccgcggcgccggttgctgaacaacgacatgcgcgag
atcattcgcgagtacgaacgtctctggctggcgcgcaaccgcctcggcgggctgtccgac
agcgtcgcccggttggagcgtgtgcgcgcccgctatacttctcaggagcagcacgcatga
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