Rhodococcus rhodochrous: 4535765_03683
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Entry
4535765_03683 CDS
T05521
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt00860
Porphyrin metabolism
rrt01100
Metabolic pathways
rrt01110
Biosynthesis of secondary metabolites
rrt01120
Microbial metabolism in diverse environments
rrt01240
Biosynthesis of cofactors
Module
rrt_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
rrt_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
4535765_03683 (hemD)
Enzymes [BR:
rrt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
4535765_03683 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
4535765_03683 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
SNV23311
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All DBs
Position
1:complement(3978050..3979615)
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AA seq
521 aa
AA seq
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MSRVRKHNPGRILFVGSGPGDPALLTVRARDVLAGATIAFTDPDVDKGVVALVGVDHGTD
PETGEPVAEVRPALGEPAEVAKTLVAEAKAGRDVVRLVAGDPLTTDSVIAEVNAVARTQV
VFEVLPGLPAGSSVPSYAGMALGSCHTEVDVRGEVDWAALAAAPGPLVLHATSGHLAETA
SALVEHGLAPQTPAAITVRGTTRQQRTVEATLATLNDAGSELVGPLVVTVGKVVSHRNKM
SWWESRALYGWTVLVPRTKDQAGEMSERLVTHGAIPMEVPTIAVEPPRSPAQMERAVKGL
VDGRYQWVVFTSTNAVRAVWEKFEAFGLDARAFSGVKIACVGEATAAKVRSFGIIPELVP
SGEQSSLGLLAEFAPYDDVFDPVNRVLLPRADIATETLAEGLRERGWEIDDVTAYRTVRA
APPPAATREMIKTGGFDAVCFTSSSTVRNLVGIAGKPHARTIVACIGPKTAETAIEFGLR
VDVQPETAQIGPLVDALAEHAARLRAEGALPPPRKKSRARR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagtccgtaagcacaaccccgggcgcatcctgttcgtgggatcgggtccgggc
gatcctgcgctgctcaccgtgcgcgcgcgtgacgtgctggcgggcgccacgatcgccttc
accgaccccgatgtcgacaagggtgtcgtggccctcgtgggtgtcgatcacggcaccgat
ccggagaccggtgagcccgtcgccgaggtccgtcccgcactcggcgagcccgccgaggtc
gccaagacgctcgtcgccgaggcgaaggccggacgcgacgtggtgcgcctcgtcgccggc
gaccccctcaccaccgactcggtgatcgccgaggtcaacgccgtcgcccgcacccaggtg
gtcttcgaggtcctgccgggcctgcccgccgggtcgtcggtgccgagctacgccggtatg
gcgctcggctcgtgccacaccgaggtcgacgtgcgcggagaggtcgactgggcagcgctc
gccgcagcccccggccccctcgtgctccacgcgacctccggtcacctcgccgagaccgcc
agcgcgctcgtcgagcacggtctcgcgccgcagacccccgccgcgatcaccgtgcgtggc
accacccgtcagcagcgcaccgtcgaggccaccctcgcgaccctgaacgatgcgggttcc
gagctcgtcggtccgctggtcgtcaccgtcggcaaggtcgtctcgcaccgcaacaagatg
tcgtggtgggagtcacgcgcactgtacggctggaccgtgctcgtgccccgcaccaaggat
caggccggcgagatgagcgagcggctcgtcacgcacggcgcgatcccgatggaggtgccg
accatcgcggtcgagccgccgcgcagccccgcgcagatggaacgcgcggtcaagggcctg
gtcgacggccgctaccagtgggtggtcttcacctccaccaacgcggtgcgtgcggtgtgg
gagaagttcgaggcgttcggtctcgacgcgcgggccttctccggcgtgaagatcgcgtgc
gtcggtgaggccaccgccgcgaaggtgcgctcgttcggcatcatccccgaactcgtgccc
agcggcgaacagtccagcctcggcctgctcgccgagttcgctccgtacgacgacgtcttc
gacccggtcaaccgggttctgctgccgcgcgccgacatcgccaccgagaccctcgccgag
ggcctgcgcgagcgcggctgggagatcgacgacgtcaccgcctaccgcaccgtgcgtgcc
gctccgccgccggccgcgacccgcgagatgatcaagaccggtggtttcgacgcggtgtgc
ttcacgtcgtcgtcgaccgtccgcaatctcgtgggtatcgccggcaagccgcacgcccgc
acgatcgtcgcgtgcatcggcccgaagacggccgagacggcgatcgagttcggtctgcgg
gtggacgtgcagcccgagacggcgcagatcgggcccctggtcgacgcgctcgccgagcat
gcggcccggctccgcgccgagggcgcactgcccccgccgcggaagaagtcccgagcccgc
cgctga
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