KEGG   Rathayibacter rathayi: C1O28_00090
Entry
C1O28_00090       CDS       T05845                                 
Name
(GenBank) 1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
rry  Rathayibacter rathayi
Pathway
rry00250  Alanine, aspartate and glutamate metabolism
rry00330  Arginine and proline metabolism
rry01100  Metabolic pathways
rry01110  Biosynthesis of secondary metabolites
Module
rry_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:rry00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    C1O28_00090
   00330 Arginine and proline metabolism
    C1O28_00090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rry03000]
    C1O28_00090
Enzymes [BR:rry01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     C1O28_00090
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     C1O28_00090
Transcription factors [BR:rry03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    C1O28_00090
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: AZZ47790
LinkDB
Position
complement(14855..18316)
AA seq 1153 aa
MSPTPLPLPPARPRQPRPRPDSVDPRLVDKSVALVRRWLREASAIPTDASGAQLAGVLKD
PSGLDFTVGFVDGVVRPEDTRVAAAALTAIAGGVPGFLPAPMRAAVTLGGVLAPLVPDVV
VPIARRVLRRMVGHLIIDATDSRLGPAIAAIRGHGVRLNLNLLGEAVLGREEAHRRLEGT
HRLLARDDVDYVSIKVSSSTAPHNPWAFDAAVEDIVEELTPLFARAAAASPQKFINLDME
EYKDLDLTIAVFTRILDRPEFTDLEAGIVLQAYLPDALSAMIRLQEWSAARRARGGAAIK
VRLVKGANLPMEQVEASVHGWPLATWSSKQDSDTNYKRVLDYALHPERIRAVRVGVAGHN
LFDVAYSWLLAGTRGVREGIEYEMLLGMAQGQAEAVRRTVGSLLLYTPVVAPAEFDVAIA
YLIRRLEEGASSQNFMSAVFELEADPALFAREEERFRASVAALDGAVPPAHRVADRFAAS
GRPGLGDYRSTPDTDPSVAANREWAEAILARVPSSRAGVDAIEAATIGTLGELEAVLSGA
RTSGWSDVPADERARILHRAGDELEARRAELLEVMAAEGGKTLDQGDPEVSEAVDFAHYY
AERALELDAVDGARFHPAALTLVTPPWNFPVAIPAGGVLAALAAGSAVVLKPAGPTARCG
AVVAEALWAADVPREALRLLRLPEEELGRDLIASPAVDRVILTGAYETAELFRSFRHDLP
LLAETSGKNAIIVTPSADLDLAVRDVVASAFGHAGQKCSAASLVVLVGSVAHSTRFRGQL
LDAVSSLTVGYPTDPATRMGPVIEPAEGKLLRGLTTLGAGETWLLRPRKLDESGRLWSPG
VREGVRRGSEFHRTEYFGPILGIMTAATLDEAIALVNEVDYGLTSGLHALDPDEIGTWLD
GIEAGNLYVNRGITGAIVQRQPFGGWKKSAVGPGTKAGGPDYLLGLGSWSSTAAEATAPV
VGPAARLLAAARAELSEEEYAGVERTARSCAAAWSEGAPRDVTGLAAERNVFRHLPYDSA
VLVRLADGEALGSLVRVAVAAATARASAVVSSAVVLPPRLAAALTETAGAVVVEDDAAWE
ARVRAHGAGRVRLLGASAATVTAATDGRPDLAVYAGEATEAGRLELLPFVREQAVSITAH
RFGTPDHLTDALL
NT seq 3462 nt   +upstreamnt  +downstreamnt
atctcgccaaccccgctcccgctcccgccagcccggccccgccagccccggccccgcccc
gactccgtcgacccccgcctcgtcgacaagagcgtcgctctggttcggcgctggctgcgc
gaggcctccgcgatccccaccgatgcctccggggcgcagcttgcgggcgtgctgaaggat
ccgtccggcctggacttcaccgtcggcttcgtcgacggcgtcgtccgccccgaggacacc
cgcgtggccgcggccgcgctgacggcgatcgcgggcggcgtgcccggcttcctgcctgct
ccgatgcgcgccgcggtcaccctcggcggtgtgctggcaccgctcgtcccggacgtcgtg
gtgccgatcgcgcgcagggtgctgcggcggatggtcggccacctcatcatcgacgcgacc
gactcgcgcctgggcccggcgatcgcagcgatccgcggccacggcgtgcggcttaacctg
aacctgctcggcgaggccgtcctcggccgcgaggaggcccaccgccgcctggagggcacc
caccgcctcctcgcccgcgacgacgtcgactacgtctcgatcaaggtctcctcgagcacc
gccccgcacaacccgtgggcgttcgacgccgcggtcgaggacatcgtcgaagagctcacg
ccgctgttcgcgcgagccgccgccgcctcgccgcagaagttcatcaacctcgacatggag
gagtacaaagacctcgacctcactatcgcggtcttcacccgcatcctggaccggccggag
ttcacggatctcgaggccggcatcgtgctgcaggcgtacctgcccgacgcgctctcggcg
atgatccgcctacaggagtggagcgccgcccgacgtgcccgcggtggcgccgccatcaag
gtgcgcctggtcaagggcgcgaacctgccgatggagcaggtcgaggcgtcggtgcacggc
tggccgctggcgacctggagcagcaagcaggactcggacacgaactacaagcgcgtgctc
gactacgcgctgcacccggagcggatccgcgccgtgcgggtcggcgtcgcgggccacaac
ctcttcgacgtcgcgtactcgtggctgctcgccggcacccgcggcgtccgcgaggggatc
gagtacgagatgctgctcggcatggcgcagggccaggcggaggcggtgcgccgcacggtc
ggctcgctcctgctctacacgccggtcgtcgcgccggccgagttcgatgtggcgatcgcc
tacctgatccgccggctggaggagggcgcgtcgagccagaacttcatgtccgccgtcttc
gagctcgaggccgatccggcgctgttcgcgcgggaggaggagcggttccgcgcctccgtc
gccgccctggatggcgctgtgcctccggcgcaccgcgtggccgaccgcttcgccgcgagc
ggccgccccgggctgggcgactaccgcagcacccccgacaccgacccgtccgtcgccgcg
aaccgtgagtgggccgaggcgatcctcgcgcgcgtcccctcctcccgcgccggcgtcgac
gcgatcgaggccgccacgatcggcaccctcggcgagctggaggccgtgctctccggagcg
cgcaccagcggctggagcgacgtcccggccgacgagcgcgcccgcatcctgcaccgcgcc
ggcgacgagctggaggcgcggcgcgccgagctgctggaggtgatggcggccgagggcggc
aagacgctcgaccagggcgaccccgaggtctcggaggccgtggacttcgcccactactac
gccgagcgcgcgctcgaactcgacgcggtggacggcgcccgcttccacccggccgcgctg
acgctggttactccgccgtggaacttcccggtcgcgatcccggccggaggcgtgctcgcg
gcgctggcggccggctcggccgtggtgctcaagcccgcaggtcccaccgcgcgctgtggc
gccgtcgtggccgaggcgctgtgggcggcggacgtgccgcgcgaggcgctgcggctgctc
cgcctgccggaggaggagctggggcgcgacctgatcgcctcgcccgcggtggaccgtgtg
atcctcaccggcgcctacgagacggccgagctgttccgctcgttccggcacgacctcccg
ttgctcgccgagaccagcggcaagaacgcgatcatcgtcaccccctcggccgacctcgac
ctcgcggtgagggacgtggtggcgagcgccttcgggcacgccgggcagaagtgctcggcc
gcctcgctcgtggtgctggtcggctccgtcgcccactcgacgcggttccgcgggcagctg
ctcgacgcggtctcctccctcaccgtcggctacccgacggaccctgcgacgcggatgggc
ccggtgatcgagccggccgagggcaagctgctgcgcggcctgacgacgctcggcgccggc
gagacctggctgctgcggccgcggaagctggacgagtccggccggctgtggagcccgggc
gtgcgggagggcgtgcgccgcggctccgaattccaccgcaccgagtacttcgggccgatc
ctgggaatcatgacggcggcgaccctcgacgaggcgatcgccctggtgaacgaggtggac
tacgggctcacctcgggcctgcacgcgctcgacccggacgagatcggcacctggctcgac
gggattgaggccggcaacctgtacgtgaaccgcgggattaccggtgcgatcgtgcagcgc
cagccgttcggcggctggaagaagtcggcggtcgggccgggcacgaaggcgggtgggccg
gactacctgctcgggctgggctcgtggagttcgacggcggcggaggcgacagccccggtc
gtcggcccggcggcgcgactgctcgcggcggcgcgcgccgagctctcggaggaggagtac
gccggggtggagcgcacggctcgcagctgcgcggcggcgtggagcgagggagcgccccgc
gatgtgacggggctggcggcggagcggaacgtgttccggcacctgccctacgactccgcg
gtgctggtgcgcctggccgacggggaggcgctcggctcgctcgtgcgggtggccgtcgcc
gcggcgaccgctcgggcgtccgcggtggtctccagcgctgtggtgctgcctccgcggctc
gccgccgcgctcaccgagaccgcgggggccgtggtggtcgaggacgacgcggcgtgggag
gcgcgagtgcgcgcgcatggcgccggacgggtgcgcctgctgggcgcctccgccgcgacg
gtcacggccgcgacggacggccgccccgacctcgcggtctacgccggcgaggcgaccgag
gcgggccgcctggagctactgccgttcgtccgcgagcaggccgtctccatcaccgcccac
cgcttcggcacacccgaccacctcacggacgccctactctga

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