Rathayibacter rathayi: C1O28_02475
Help
Entry
C1O28_02475 CDS
T05845
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rry
Rathayibacter rathayi
Pathway
rry00190
Oxidative phosphorylation
rry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rry00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
C1O28_02475
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1O28_02475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rry03019
]
C1O28_02475
Enzymes [BR:
rry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
C1O28_02475
Messenger RNA biogenesis [BR:
rry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C1O28_02475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AZZ48205
UniProt:
A0A2S5Y065
LinkDB
All DBs
Position
complement(495462..497666)
Genome browser
AA seq
734 aa
AA seq
DB search
MDGDNLLLEDGLSDDLDDDFDEEEEHSDPLLPDNRYLDRELSWLAFNQRVLELAEDPLVP
ALERANFLAIFSSNLDEFFMVRVAGLKRRILTGLALPTNIGRVPVDVLTDISEKAHLLQQ
RHSRAFKQLVEPALREGGIDLVRWDELSDAERTVLDDYFSAQVFPVLMPLAVDPAHPFPY
ISGLSLNLSVRVRNPKTQKVEFARLKVPQMLPRFVRIAGVATPGEPMRFISLEDLIANQL
DDLFPGMEILDHHVFRVTRNEDVEVDEDETENLIKALEKELLRRRFGPPIRLEVTDDMDD
ETLGLLVRELDITTQEVYKLPAPLDLSGLFSLQKIDRPDLKYPNHVPTTAVQLSPSEPNQ
RQDVFRAVSRGDVLLHHPYESFATSVQSFLEQAAADPDVLAIKQTLYRTSGDSPIVEALI
DAAESGKQVLALVEIKARFDEQANISWARKLEKAGVHVVYGLVGLKTHCKLALVIRQEKG
GVLRHYSHIGTGNYNPKTSRIYEDLGLLTADPEVGKDLTRLFNELSGYAIEKKFKRLLVA
PRHLRKGLLKRIAVETGHARAGRPSGIRIKVNSIVDEAVIDALYRASQAGVPVDVWVRGI
CGLKPGQEGLSETIRVRSILGRYLEHSRIFSFVNGGEPEVFIGSADMMHRNLDRRVEALV
RIVEPAHLSEIDDMFERAMDERTASWWLGSDGDWTRHHLDADGAPLADLQNQLMQHITHR
KRAATRSANRALSR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacaacctgcttctcgaagacggcctgagcgatgacctcgacgacgacttc
gacgaggaggaggagcactcagacccgctcctccccgacaaccgctacctcgaccgtgag
ctgagctggctcgccttcaaccagcgcgtcctcgagctggcggaagatccgctggtgccg
gcgctcgagcgggccaacttcctcgcgatcttctcgtcgaacctcgacgaattctttatg
gtccgcgtcgccggcctcaagcgccgcatcctcacggggctggctttgccgaccaacatc
ggccgcgtccccgtcgacgtactgaccgacatctccgaaaaggcgcatctgctccagcag
cgccattcccgggcgttcaagcaactcgtcgagcccgcgctgcgcgagggcggcatcgac
ctcgtccgctgggacgagctgagcgacgccgagcgcacggtgctcgacgactatttctcg
gcgcaggtgttccccgtgctgatgccactggcggtcgacccggcccacccgttcccctac
atttccggcctttcgctcaacctctcggtgcgcgttcgcaatcccaagacgcagaaggtc
gagttcgcgcgcctcaaggttccgcagatgctcccgcgcttcgtgcggatcgccggggtg
gcgaccccgggcgagccgatgcggttcatctcgctcgaggacctgatcgccaaccagctg
gacgacctgttccccggcatggagatcctcgaccaccacgtcttccgggtgacccgcaac
gaggacgtcgaggtcgacgaagacgagaccgagaatctgattaaggccctcgagaaagag
ctgctgcgtcgccgattcggcccgcccatccgcctcgaggttaccgacgacatggacgac
gagacgctgggcctgctggtgcgtgagctcgacatcacgacccaggaggtctataagctc
ccggctccgctcgatctcagcgggctcttcagcctgcagaagatcgaccggcccgacctg
aaataccccaaccacgtcccgacgacggccgtgcagctctcgccgagcgagccgaaccag
cgccaggacgtcttcagggccgtgtcgcgcggtgacgtgctgctgcaccacccctacgag
tcgttcgcgacgagcgtgcagtccttcctcgagcaggcggcggcggatccggatgtgctc
gcgatcaagcagacgctgtaccgcacctcgggcgactcccccatcgtcgaggcgctgatc
gacgcggccgagtccggcaagcaggtgctcgcgctggtcgagatcaaggcgcgcttcgac
gagcaagccaacatctcgtgggcccgcaagctcgagaaggcgggcgtgcacgtcgtctac
ggcctcgtcgggctgaagacgcactgcaagctcgcgctcgtcattcgccaggagaagggc
ggggtgctccgccactactcccacatcggcaccggcaactacaacccgaagacctcgcgc
atttatgaagacctcggcctgctcactgccgacccggaggtcggcaaggacctcacccgc
ctgttcaacgaactctcgggttacgcgatcgagaagaagttcaagcgcctgctcgtcgcg
ccgcgccacctgcgcaaggggctgctgaagcggatcgccgtcgagaccgggcacgcgcgc
gccggacggccctcgggcatccggatcaaggtgaactcgatcgtggacgaggccgtaatc
gacgcgctctaccgtgccagccaggccggcgtgccggtggacgtctgggtccgcggtatc
tgcggcctcaagcccgggcaggaggggctctccgagaccatccgagtgcgctcgatcctc
ggccgctatctggagcactcccgcatcttcagcttcgtcaacggcggcgagcccgaggtc
ttcatcggcagcgccgacatgatgcaccgcaacctcgaccgccgcgtcgaggcgctggtg
cggatcgtcgagccggcgcacctcagcgagatcgacgacatgttcgagcgggcgatggac
gagcggaccgcctcctggtggctcggctcggacggcgactggacgcggcaccacctggac
gcggacggcgctccgctcgccgacctgcagaaccagctgatgcagcacatcacccaccgc
aagcgcgcggcgacacgctcagccaaccgggccttgagccgatga
DBGET
integrated database retrieval system
