Rhodococcus ruber: CS378_13290
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Entry
CS378_13290 CDS
T05142
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00010
Glycolysis / Gluconeogenesis
rrz00020
Citrate cycle (TCA cycle)
rrz00620
Pyruvate metabolism
rrz00650
Butanoate metabolism
rrz01100
Metabolic pathways
rrz01110
Biosynthesis of secondary metabolites
rrz01120
Microbial metabolism in diverse environments
rrz01200
Carbon metabolism
rrz01210
2-Oxocarboxylic acid metabolism
Module
rrz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CS378_13290 (nifJ)
00020 Citrate cycle (TCA cycle)
CS378_13290 (nifJ)
00620 Pyruvate metabolism
CS378_13290 (nifJ)
00650 Butanoate metabolism
CS378_13290 (nifJ)
Enzymes [BR:
rrz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CS378_13290 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4
Fer4_7
Fer4_21
TPP_enzyme_C
Fer4_2
Fer4_6
Fer4_8
Fer4_9
Fer4_10
Fer4_17
Fer4_16
Fer4_15
Fer4_4
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
ATQ29603
LinkDB
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Position
complement(2957364..2960936)
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AA seq
1190 aa
AA seq
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MTRATVDGNEAAVSVAYRLNEVCCIYPITPSSAMAELADEWSSRHRPNLWGTVPSVVEMQ
SEGGAAGALHGALQGGALATTFTASQGLLLMIPNMYKIAGELTSAVMHVAARSLAAQGLS
IFGDHSDVMAVRQTGFALLASASVQEAHDLALVAQAATLRTRVPFVHFFDGFRTSHELNT
IETLTDDDLRALVPEELIHEHRGRALSPERPFIRGTAQNPDTYFQARETVNPFYARVPAV
VDELMAQLGERTGRGLRIVQYAGHPEAERVLVLMGSGAQTASDTAAALAARGERVGVVQV
RLYRPFPAEALLAALPATVRTIGVLDRTKEPGSHGEPLYLDVVAALAEAHADGERAVMPR
ICGGRYGLSSKEFTPGMVAGVFAELAREGPRRRFTVGIDDDVSGTSITYDPSFDIESPDT
VRAIFYGLGSDGTVGANKNTIKILGDEEHLHAQGYFVYDSKKSGSQTVSHLRFGPRPIRA
PYLVSRADLVGCHQFRFLDKIDVLGPAAPGATLLLNCRHRPDKVWDALPRRVQEQILDKG
ITLYAVDAGRIAREVGLAGRINVVLQTCFFAISDVLPREQAVARIKKSVEKTYGNRGADV
LRRELAAVDRALDELHRIEVPGRVTTTRVPAPIVPEHAPEFVRTVTAEMMAGRGDALPVS
AFPVDGTYPSGTTAYEKRNISELVAAWDPDTCIQCGNCSFACPHSVIRTKFYDKSHLDGA
PEQFGSAALGAVGLPDARYTLQVYAEDCTGCGLCVEACPAVTPGATVTKAINLAPREPRV
AAERENIAFFETLPTADRARVDFGTVRGTQFLEPLFEFPGACAGCGETPYLKLLSQLFGD
RLMIANATGCSSIYGGNLPTTPWATNADGRGPAWSNSLFEDNAEFGLGFRLAADEHTRLA
RRRLTELREAVGADLVDSILTAPQLRESELRAQRERVAELETLLAELDPTTTADLRSVLD
HLVRRSVWIVGGDGWAYDIGAGGLDHVLASGHNVNVLVLDTEVYSNTGGQMSKATPLGAI
AKFAAAGKTVPMKDIALQAIAYGNVYVARVAMGADPQHTLQAMREAEAYEGPSLVIAYSQ
CIAHGIDMRHGMDQQYRAVASGHWPLIRYDPVLRAAGENPFLLDSHRPRIPLEDYRSREL
RYRALANTDPAEYDRLLGLAEEAIAQRWDRYEDMASQGSHHFTADARKDR
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtgccacggtggacggaaacgaggcggccgtgtcggtcgcctaccggctcaac
gaagtgtgctgcatctatccgatcaccccgtcgtcggcgatggccgagctggccgacgaa
tggtccagccggcaccggccgaacctgtggggcaccgtgccgagtgtggtggaaatgcag
agcgagggcggcgcggcgggcgcgctgcacggcgcgctgcagggcggggcactggcgacg
acgttcaccgcgtcgcagggcctgctgctgatgatcccgaacatgtacaagatcgccggc
gagctgacctcggcggtcatgcatgttgcggcccggtccctggccgcgcagggactgtcg
atcttcggggaccattcggacgtgatggcggtgcgccagaccgggttcgcgctgctcgcc
tcggcctcggtgcaggaagcacacgacctggcgctggtggcgcaggccgcgaccctgcgg
acgcgggtgccgttcgtccacttcttcgacggcttccgcacctcgcacgagctcaacacc
atcgagacgctgaccgacgacgacctgcgggcactggtgcccgaggaactgatccacgag
catcgcggacgcgcgttgtcgccggagcggccgttcatccggggcaccgcgcagaacccg
gacacctacttccaggcacgggagacggtcaacccgttctacgcccgggttccggcggtg
gtggacgagctgatggcgcagttgggtgagcgcaccggccgcggcctgcgcatcgtccag
tacgccgggcaccccgaggcggaacgggtgctggtcttgatgggatccggggcgcagacc
gcatccgacaccgctgccgcgctcgccgcccgcggtgagcgcgtcggggtggtgcaggtg
cggctgtaccgaccctttcccgccgaggcgctgctggcggcgctgccggcgacggtgcgc
acgatcggcgtgctggaccgcaccaaagagcccgggtcgcacggcgagccgctgtatctc
gacgtcgtcgcggccctcgcggaggcacatgccgacggtgagcgagccgtcatgccccgg
atctgcggcggccgctacggcctgtcgtcgaaggagttcacgcccgggatggtggccggc
gtcttcgccgagctcgcccgtgaggggccccgacgccggttcaccgtcggcatcgacgac
gacgtgtccggcaccagcatcacctacgacccgtccttcgacatcgaatcccccgacacc
gtgcgggcgatcttctacggcctgggctcggacgggaccgtcggggccaacaagaacacc
atcaagatcctcggcgacgaggaacacctgcacgcgcagggctacttcgtctacgactcg
aagaagtccggctcgcagaccgtctcgcatctgcgtttcggaccgcggcccatccgcgca
ccgtatctggtgagccgcgcggacctcgtcggctgccatcagttccgattcctcgacaag
atcgacgtcctgggaccggccgcaccgggagcgaccctgctgctgaactgcagacaccgg
ccggacaaggtctgggacgcgctgccccgccgggtccaggaacagatcctcgacaagggg
atcacgctgtacgccgtcgacgcgggccggatcgctcgcgaggtcgggctcgccgggcgg
atcaacgtcgtgctgcagacctgcttcttcgcgatctcggatgtgctgccgcgtgagcag
gccgtcgcccggatcaagaagtcggtggagaagacctacggcaaccgtggagccgacgtg
ctgcgacgcgaactggccgcggtggaccgggcgttggacgagctgcaccggatcgaggtg
cccggccgggtgaccaccacccgagtaccggcgccgatcgtgccggagcacgcgcccgag
ttcgtccgcaccgtcaccgcggagatgatggccgggcgtggggatgccttgccggtcagc
gcgtttcccgtcgacgggacctatccgagcggcaccaccgcctacgagaagcgcaacatt
tcggaactggtcgcagcatgggacccggacacctgcatccagtgcggaaactgcagtttc
gcctgtccgcacagcgtgatccgcaccaagttctacgacaaatcccacctggacggtgcc
ccggagcagttcggctcggcggcactgggggccgtgggtctgccggatgcccggtacacc
ctgcaggtctacgccgaggactgcaccgggtgcgggctgtgcgtcgaggcctgtcccgcc
gtgactcccggcgcgacggtcaccaaggccatcaacctcgcaccccgcgaaccgcgagtg
gccgccgaacgcgagaacatcgccttcttcgagacgctgccgacggccgaccgggcccgg
gtggacttcggcaccgtccgcggaacgcagttcctcgagccgctgttcgaatttcccggc
gcctgcgcgggctgcggggagaccccgtacctcaagctgctctcccaactgttcggcgac
cggttgatgatcgcgaacgccacgggctgctcgtcgatctacggcggcaatctgcccacc
accccctgggcgaccaacgcggacggacgcggccccgcctggtccaactcgctgttcgag
gacaacgccgaattcgggctggggttccggctggccgccgacgagcacacccggctcgcc
cggcggcgcctgaccgaactacgggaggcggtcggtgccgacctcgtcgacagcatcctg
acggcgccgcaactgcgcgagtccgagctgcgcgcccagcgggaacgagtcgccgaactc
gaaacccttctcgcagagcttgatccgaccacgaccgccgacctgcgcagtgtgctcgac
cacctggtgcggcgcagcgtgtggatcgtcggcggcgacggctgggcctacgacatcggt
gccgggggtctcgaccacgtcctggccagcggtcacaacgtcaacgtcctggtcctcgac
accgaggtgtattccaacaccgggggacagatgtccaaggccaccccgctcggcgcgatc
gcgaagtttgccgcagccggcaagacggttccgatgaaagacattgcgttgcaggccatc
gcctacggcaacgtctacgtcgcccgggtcgcgatgggtgccgatccgcagcacaccttg
caggcgatgcgggaagccgaagcctacgagggcccgtcgctcgtcatcgcctacagtcag
tgcatcgcgcacggtatcgacatgcgtcacgggatggaccagcagtaccgcgcggtggcc
agcgggcactggccgctgatccgctacgacccggtgttgcgggcggccggggagaatccg
ttcctgctcgattcgcaccggccgaggattccgctcgaggactaccgcagccgcgagctg
cggtaccgcgcgctcgccaacaccgacccggcggaatacgaccggcttctcggcctcgcc
gaagaggcgatcgctcagcgctgggaccggtacgaggacatggcatcgcaagggtcgcac
cacttcaccgccgacgcccgcaaggatcgctga
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