Rhodococcus ruber: CS378_23405
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Entry
CS378_23405 CDS
T05142
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00300
Lysine biosynthesis
rrz01100
Metabolic pathways
rrz01120
Microbial metabolism in diverse environments
rrz01230
Biosynthesis of amino acids
Module
rrz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CS378_23405
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rrz01002
]
CS378_23405
Enzymes [BR:
rrz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CS378_23405
Peptidases and inhibitors [BR:
rrz01002
]
Metallo peptidases
Family M20
CS378_23405
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ATQ31395
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All DBs
Position
5113071..5114147
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AA seq
358 aa
AA seq
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MSAPHLDLHADPIELTAALVDIPSVSRDEAVIAESVEQALRTQTTGFEIVRSGNAVLART
RLGRPSRVLLAGHLDTVPIADNVPSRRAGELLYGCGTADMKSGDAVFLHLAATIAEPAHD
LSLVFYDCEEIAAVHNGLGRIERDLRDWLDADVAILGEPTAGQIEAGCQGTLRVRIAASG
VRAHSARSWLGDNAIHRLAPVLGRLAAYEPRSVDIDGCVYREGLSAVRIAGGVAGNVVPD
AADLDVNFRFAPDRTVEQALAHVREVFDGLDVTLELTDSSPGALPGLAHPTAADLVAAAG
GRFRAKYGWTDVARFAALGIPAVNYGPGDPNLAHTRDEHVPVGQITEVADTLRRYLAG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaccgcacctggacctgcatgccgatccgatcgagctgaccgctgccctggtg
gacatccccagtgtctcccgggacgaggcggtgatcgccgagtccgtcgaacaggcgctg
cgcacccagaccaccggtttcgagatcgtccgcagtggtaacgcggttctcgcccgcacc
cgcctcgggcggccgagccgggtgttgctggccggtcacctcgacaccgtgcccatcgcg
gacaacgtgccgtcgcggcgcgcgggggagttgctgtacgggtgcggcacggccgacatg
aagtcgggcgacgcggtgttcctgcacctggccgccacgatcgccgagccggcgcacgat
ctgagcctggtgttctacgactgcgaggagatcgccgcggtgcacaacggtctcggccgc
atcgaacgggacctgcgcgactggctggacgcggacgtggcgatcctcggcgaaccgacg
gccggccagatcgaggcgggctgccagggcaccctgcgggtgcggatcgcggcgagcggg
gtgcgggcgcattcggcgcggtcctggctgggagacaacgcgatccaccggctggccccg
gtgctcgggcggctcgcggcctacgaaccgcgctcggtggacatcgacggctgcgtctac
cgcgagggtctgtccgcggtgcggatcgccggcggtgtcgccggcaacgtggtgcccgac
gccgcggacctcgacgtcaacttccggttcgcgcccgaccgcacggtcgagcaggcgctc
gcgcacgtgcgagaggtgttcgacggtctcgacgtcaccctcgagctcaccgacagttcg
cccggcgcgctgcccggcctggcccaccccaccgcggcggacctcgtcgccgcggccggc
ggccggttccgggccaagtacgggtggacggacgtcgcgcggttcgccgcgctggggatc
ccggcggtcaactacggtcccggcgatccgaacctcgcgcacacccgggacgagcacgtg
cccgtgggacagatcaccgaggtcgccgacacgctgcgcaggtacctcgccggctga
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