Renibacterium salmoninarum: RSal33209_0007
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Entry
RSal33209_0007 CDS
T00641
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rsa
Renibacterium salmoninarum
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsa03032
]
RSal33209_0007
03400 DNA repair and recombination proteins [BR:
rsa03400
]
RSal33209_0007
Enzymes [BR:
rsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RSal33209_0007
DNA replication proteins [BR:
rsa03032
]
Prokaryotic type
DNA Topoisomerases
RSal33209_0007
DNA repair and recombination proteins [BR:
rsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RSal33209_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
IKI3
Motif
Other DBs
NCBI-ProteinID:
ABY21767
UniProt:
A9WR35
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All DBs
Position
8221..10785
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AA seq
854 aa
AA seq
DB search
MSDETGEIITDRIEQVDLQTEMQRSYLDYAMAVIVGRALPDVRDGLKPVHRRVLYAMYDG
GYRPDRSFNKCARVVGEVMGQYHPHGDSAIYDALVRLIQDWTMRYPLALGQGNFGSPGND
GAAAPRYTETKMAPLAMEMVRDIDKRTVDFQDNYDGKNQEPVILPARFPNLLVNGSSGIA
VGMATNIPPHNLREVAEGAQWYLANPTASKEELLEALIQRIKGPDFPTGAQILGHKGIED
AYRTGRGSITMRAVVNVEEIQNRTCLVVTELPYQANPDNLAVKIAELVKDGKIGGIADLR
DETSGRTGQRLVVVLKRDAVAKVVLNNLYKHTSLQDNFSANMLAIVDGVPRTLSLDAFIR
HWVAHQMEVIVRRTRFLLNEAEARAHILRGLLKALDALDEVIALIRRSPTVDEARGGLID
LLGIDDLQVNAILDMQLRRLAALERQKIQDENAKLELEIAEYNSILASEDRQRTIVSEEL
AEIVNKFGDERRTQIMLGYDGDMSMEDLIPEEEMVVTITRGGYVKRTRSDNYRSQHRGGK
GIKGAQLRGDDVVEHFFVTTTHHWLLFFTNLGRVYRAKAYELVEAGRDAKGQHVANLLAF
QPDEKIAQVLDLKDYQQSPYLVLATKNGLVKKTRLEDYDTNRSAGVIAINLRDEDELVSA
QLVSESDDMLLVSRKGQSIRFTATDEALRPMGRATSGVTGMKFRQDDELLAANVVTEDSY
VFIVTEGGYAKRTAVEEYRTQGRGGLGIKVAKLVEDRGDLVGALIVQDDDEVLVVMEGGK
VVRSNVAEVPAKGRDTMGVIFAKPDKNDRIIEVARNRERGLESEETEDEVPLTEGQTAEG
QTETGTEEAPIEHE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgagaccggcgaaatcatcacagaccggattgaacaggtcgatctgcaaacc
gaaatgcaaaggtcctacttggactacgccatggcagttattgttggccgtgcgttgccg
gatgtgcgcgatgggcttaagcctgtgcaccgtcgggtgctttatgcgatgtacgacggc
ggttaccggccggatcgctcgttcaataagtgtgctcgtgtggtcggtgaagttatgggc
cagtaccacccgcacggcgattcagcgatctacgatgccctggtccgcttgatccaagat
tggaccatgcgctaccccttggcacttggccaaggtaactttggttcgccgggtaacgat
ggtgctgccgctccgcgttacaccgaaaccaaaatggcgccactcgcgatggaaatggtc
cgtgacatcgacaagaggaccgtcgatttccaggacaattacgacggtaagaatcaagag
ccagtcattttgccggcgaggttcccgaacctgctggtcaatggctcctccggcattgcc
gttggtatggctaccaacattccgccgcataacctgcgtgaggtcgccgaaggtgcacag
tggtacctggctaatccaacggcaagcaaagaagagctgctcgaagccctgattcagcga
atcaaggggccagacttcccaacaggtgcccagattctggggcataaaggcatcgaagac
gcctaccgcactggccgtggttcaatcaccatgcgcgctgtggtcaatgtggaggagatc
caaaaccgcacctgcttggtcgttactgagttgccgtaccaggcaaacccggacaatctt
gcggtaaagatcgccgagctggtcaaagatggcaagatcggcggcattgctgaccttcgc
gatgagacttctggccgcaccggccagcgcctcgtcgtcgtcctgaagcgcgacgccgtc
gccaaggttgtgctgaataacctctataagcacacctcgctacaagataacttcagcgcc
aacatgcttgccattgttgatggcgtgccccgcacgctgagcttggacgcgtttatccgg
cactgggttgcgcaccagatggaagtaattgtgcgccgtacccgcttcttgctcaacgag
gcagaagcgcgggcacatatcttacgaggcctacttaaagcacttgatgcgcttgacgaa
gtaattgctttgattcgccgttcacccacggtagacgaggctcgtggtggccttatcgac
ctgcttggcatcgacgatctgcaagtgaacgcgatcctggatatgcagttgcgtcgactg
gctgccctggaacggcagaaaatccaggacgagaatgcgaagttggagctcgagattgcc
gagtacaactcgatcttggcttccgaggatcgccaacgcactatcgtcagtgaagaattg
gcggagatcgtcaataagttcggtgatgagcgacggactcagatcatgctcggctatgac
ggcgacatgagtatggaagaccttattcctgaagaggaaatggtcgtcacgattactcgc
ggtggttacgtcaagcgcacgcgcagcgataactaccgttcacagcatcgcggtggcaag
ggcatcaagggtgctcagctgcgtggagacgacgtcgtcgagcatttctttgtcacgacc
acgcaccattggctgctgttcttcaccaacttgggtcgtgtttaccgggctaaggcctat
gagctggttgaagctggacgggatgctaagggccagcacgtagcgaacttgttggctttc
caacctgacgagaaaatcgcccaggtcttggatttgaaagactaccaacagtcgccgtat
ctggtgctggcgaccaagaacggcttggttaagaaaacccggctcgaagactacgacact
aaccgttcagccggtgtgattgcgattaacctacgcgatgaagatgagcttgtttccgct
cagctggtctcggagagcgacgatatgttgctggtttcccgcaagggtcagtcgatcagg
ttcaccgcgactgatgaggcgctgcgtccgatgggccgggcaacttccggtgtcacggga
atgaagttccgccaggatgacgaattgctcgccgctaacgtagtcacagaagattcatat
gtcttcatcgtgactgagggcggttacgccaagcgcaccgcggtggaagaatatcgtacc
cagggacgaggcggtttgggcatcaaggttgccaaacttgttgaggaccgcggagatcta
gttggcgcactgattgttcaggacgacgacgaggttttggtcgttatggaaggcggcaag
gtagttcgttctaacgtggctgaggttcctgcgaagggccgtgacacaatgggcgttatt
ttcgctaaaccggacaaaaatgaccggattatcgaggtcgcacgcaatagagaacgcggc
ttggagagcgaagaaaccgaggatgaagtaccgttgactgaaggccagacggctgaaggc
cagactgagactggtaccgaggaggcaccgattgagcacgaataa
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