Renibacterium salmoninarum: RSal33209_1281
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Entry
RSal33209_1281 CDS
T00641
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rsa
Renibacterium salmoninarum
Brite
KEGG Orthology (KO) [BR:
rsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsa03021
]
RSal33209_1281
Transcription machinery [BR:
rsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RSal33209_1281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_17
HTH_AsnC-type
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABY23018
UniProt:
A9WPR0
LinkDB
All DBs
Position
complement(1091268..1091939)
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AA seq
223 aa
AA seq
DB search
MAATIQLSPYTGFGSRTRLSLYQMDTPKTTEAAPAALPKPGQGLDVLVELIRATAQGNHE
AFAELYRLTSRRVYGMARRVLIDAELAEDATQEVYLQIWQNAAKFDSSAGSPLAWLMTIA
HRRAVDKVRSTQSSTDREARYGAASQGIEHDEVADAVSDKIDAESVVKCLATLTDTQQES
VKLAYYGGLTYREVAEKLGAAVPTVKSRIRDGLLRLKSCLEVS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcaacgattcagttatctccatatacgggcttcggatcaagaacccgcctaagc
ttgtaccaaatggatacaccgaagactaccgaagctgcccccgcagccctgcccaagccg
ggccaaggacttgatgttttggtcgagttaatcagagccaccgcccagggcaaccatgaa
gcatttgctgagctgtatcgactcacctcgcgtcgggtctatggcatggcacggcgggtg
ttgattgatgccgagctggccgaggatgctacccaagaggtttatctgcagatttggcag
aacgcagcgaaatttgattccagcgcaggttcgccgcttgcttggctcatgacgattgcg
catcgtcgagcggtagacaaagtgcgatcgacgcaaagttccactgaccgggaagcccgt
tatggtgcagccagtcaaggcatcgaacacgatgaagttgccgatgccgttagtgacaaa
attgacgcagaatcagtggtcaagtgcttggctactttgactgatacccagcaagaatcg
gtcaaactcgcctattacggcggattgacttaccgcgaagtcgcggagaaattgggcgct
gcggtgcccaccgtgaaatcacggatcagagacggactattgagactgaaatcatgtttg
gaggtgagctga
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