Rhipicephalus sanguineus (brown dog tick): 119376825
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Entry
119376825 CDS
T07382
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119376825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsan03019
]
119376825
Messenger RNA biogenesis [BR:
rsan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119376825
mRNA degradation factors
5'-3' decay
Decapping complex
119376825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
119376825
NCBI-ProteinID:
XP_037502450
EnsemblRapid:
LOC119376825
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MSKGFVAFRKESQGGLHPLSVEDELLTAEVEDDYDALNDETFGGGLDEGWEEAHEKFAEL
EDRARQDSSMVDSLVDEDPLLLNQVVEQSISHLGLEDDRDDDPAIKSYSKSTTSPWPIER
GRPCSSPPPPPATLQHFGGSPKTDTIWTPKAVHPPSTENRLASLLWKLQQQSSSTQVLSQ
PVPRRSSLPPNVHTLEELERDMLHSGGSHPVPIGGSRGGGSPWVAGHTEHGVAGYPCGST
PPGHRGSAEHSTGGVLPAAFSAQQYRFGPGRPPYPPPPSGVPTLPSQLGVSPPARAPGLV
HGCMSPGNYSPGFGSRLPMPPVPHPLLGRGRGVMMGPSMLLNNTLPNHMPLQGTLPFRPG
FSGVDLRRLLYPRQVQHPLLNKNQFASSSGSGHYQQHAYQTVFGQGGLPHDSFRQASHHS
YLRPHGSLDNRDNSLFGDHSDDPYAGLMTQKEKDWLVKIQLLQVQPENPDVDDYYYVMFT
KRKAERQELPGVDGGDGDKPKFIRPERVRTESKSYTPIQFERSLGKLQVVSVNYPRKILD
MGVQRLSEDEDRKVPPDRHLLWFRQLLLDIEKLYSAVLEYEDSSCSAERRLEISEKLFAE
VQPSEERFIQVVGVRKGRSLVLRVLPKLKAEHQVATLAALLRHLSWLQRKDRHDGTLERG
LLSAVAVIEHASLNDLIQLAASLLMNPDAAFPSRFALRVAWAIVVQAEQHFQREEGGQTF
SSEVHKKWARLLSEMVDLLIASLKKHDNGKDDTSDHYSAAVHLLFPHERRALASQLQRFA
INSQLASELNTAAKSSQQSELHQQNGFGDKGAFPYCGDEPVTAVH
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaggatttgtggctttccgcaaggagtcccagggggggctgcatccgctgagt
gtcgaggatgagcttcttacggctgaagttgaggacgactacgatgccctcaacgacgag
acctttggaggtggtctcgatgagggctgggaggaggcgcatgagaaatttgctgaactt
gaggatcgagccagacaggactcctccatggtggattcactggttgatgaagaccctctt
ctgttaaaccaggtggtagagcaaagcatctctcaccttggcttggaagatgaccgagat
gatgacccagccatcaagtcttactccaagtccacaacatctccatggcccatcgaacgg
ggccgcccctgttcttcaccccccccaccgccggcgacgctgcaacattttggcggttcg
cccaagacggacaccatctggacacccaaggcagtccatcccccttccactgaaaacaga
cttgcttccctcctatggaaactacagcagcaaagctcctccacacaagttttgtcccag
cctgttcctcggagatcgtcgttgccccccaatgtgcacacgttggaagagcttgaacgg
gacatgctgcattctggtggcagccatccagtgcccattgggggctcccgaggcgggggg
tcaccctgggttgctggccacactgaacacggggtggcaggatacccttgtgggagcact
cctcctggtcaccggggatcagcagagcacagcactggaggagtgctgcctgctgccttc
agtgcccagcagtaccgtttcggtccaggccgaccaccctacccaccaccacctagtggt
gtgccaacgttgcctagccagcttggtgtgtcaccccctgccagagcaccaggacttgtc
catggatgcatgtcaccaggaaattattcacctggcttcggaagccggctgccaatgcct
cctgtgccccaccccttgctagggcgtggcaggggggttatgatgggtccatccatgtta
cttaacaacacacttccaaaccacatgccactgcaaggcaccctgcccttcagacctgga
ttcagtggtgtggaccttcggcgcctcctctaccctcgacaggttcaacacccgcttcta
aataagaaccagtttgcatcatcgtctggcagtggacactaccagcaacatgcgtaccag
acagtatttggccagggtggcttgccgcacgacagcttccggcaggccagccatcactcg
tatttacggccacatggcagcttggataaccgcgacaactcattgtttggtgaccattca
gacgacccttatgccgggctcatgacacaaaaagaaaaggattggttggtcaagattcag
ctgctccaagtgcagccagagaacccagatgtggatgattattactatgtgatgttcacc
aaaaggaaggcggaacgacaagagcttcctggcgtggatggaggggacggcgacaaacca
aagtttattcgaccagaacgagtgcgcacagaatctaaaagctacacgccaatccagttt
gagcggtcgttgggaaagttgcaagtggtgagtgtcaactacccgcgcaagatcctcgac
atgggtgttcagcggctgtccgaagatgaagaccgcaaggtccctccagatcgtcacttg
ttgtggttccgccaacttctgcttgacatagagaagctttactccgcagttctggagtat
gaggatagcagctgctctgcagagcgtcgtctagaaatttcagaaaagctttttgctgag
gtacagccctctgaagaacgcttcattcaggtggtgggtgtgcggaaaggccgctccttg
gtgcttcgtgtgctgcccaagctaaaagctgagcaccaggtggcaacattggcagctctg
ctgcgccacttatcatggttacagcgcaaggacaggcacgatggcacattagagcgaggg
ctgctcagtgccgtggcagtcattgagcacgcttctctgaatgacctcattcagctggcg
gccagcttgcttatgaatccagatgctgcatttcccagcagatttgctctccgtgtggcc
tgggctattgtagtacaagcagaacaacattttcagcgcgaggaaggtggccagacattc
agcagtgaagttcacaagaaatgggcaagactgctttctgaaatggtggatttactcatt
gcctctctcaagaagcatgacaatggcaaagatgacacaagcgaccactatagtgctgca
gtgcatctgctgtttccacacgagcgtcgtgcccttgcgtcacaattgcaacgatttgca
ataaactctcagcttgctagcgagctaaacactgctgcaaagtccagccagcagtcagag
cttcatcagcagaatggatttggtgacaaaggtgcgtttccctactgtggtgatgaaccc
gtaactgctgttcactaa
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