Rhipicephalus sanguineus (brown dog tick): 119389772
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Entry
119389772 CDS
T07382
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
rsan
Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rsan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119389772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsan03400
]
119389772
Enzymes [BR:
rsan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119389772
DNA repair and recombination proteins [BR:
rsan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119389772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
119389772
NCBI-ProteinID:
XP_037513090
EnsemblRapid:
LOC119389772
LinkDB
All DBs
Position
4:35602550..35606890
Genome browser
AA seq
892 aa
AA seq
DB search
MNTSACQTTVAQKVPFGDLCKLCDKISGKQDRVEKRKLLEKFITYWREFHDKLHAANGVL
AATDDSFFPAMRLLLPHLDRDRPAYGIKEATLAKLYIEVLALGKDSPDAQKLLRYRTPHV
AKAEAGDFASVAYLVLRNRCPTKGSLTVAEVNELLDELSDAHAHGGAEGSRRTREALCTL
LRRTSAAEQKWLVRMVLKEMKMGMSEGSILSCYHPDAQDVFDNSSSLTKVCRELKDPKVR
QHVVQVSLFHAVRPMLAERAEPRSVERLLNHEPFFAETKFDGERLQVHKDGSEFRYFTRR
SHDYSSGFGATADEGSLTQYIAKSFQSHVKSCILDGEVIGYDPRSDRLVSKGSHVDVKSL
TENSSLQPCFVAFDILLLNGQVVTNKPLQERVVLLDQALVEVPGRILISRRQNGSTREDA
VRLLNRAIEDQEEGIVLKRLSSVYKPNARKAGWLKLKPEYVDNLVSDLDMLILGGYFGEG
RRSGVVSHFLLGVTSGDQDDDGMPRTFWSVAKVGSGYSLQELDDLLAKLTSKWKVYNPKK
PPEKLVLAPGHKEKPDLYLEPSDSVVLQIKASELVRSSQFRTGITLRFPRVVAIRHDKPW
QDVLSYSELCELEKAAGGKLATATLGHDEDDGGSPAKKRRVGTSVKASLGTHFQPANLSG
AVKKRNILRGKELCILTGCGDLTKQELEVKVAELGGSVVQNPSKETFCVVAEKLNFRARS
YVKSRKWDVVKADKFLTLLESAELRPWEPADLWCASTETENRLKDLFDEYGDSYTVPVTA
SSLRKIFAAIPKEACKEVDDLPGFIFKFEQENFASRPQWGLFRNCTLRLSEESELNRLII
RLHGGKVQDIPGEGEAGSSDCEMNDMDASEEVMEVDSEWIDECIQAGELPLF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcagcatgtcaaaccacggtcgcccagaaagtccctttcggtgacctctgc
aaactctgcgacaagatatccggaaagcaggacagggtcgagaagcggaaactgctggag
aagttcatcacgtactggcgcgagtttcacgacaaacttcacgccgcgaacggagttctg
gcagcgaccgatgattccttcttcccggcaatgcggcttctcctgccgcacctggacaga
gatcgaccggcgtatggaatcaaagaagccactctggccaaactgtacatcgaagtgctc
gcactcggcaaagacagtcccgatgctcaaaagttgctgcgctacagaacgccgcatgtg
gccaaagcggaagccggagatttcgctagcgtcgcgtatctagtgctgcgaaatcgctgc
cccacgaaagggtcgctaaccgtcgccgaagtcaatgagctcttggacgaactgtctgac
gcgcatgcgcacggaggcgcagaaggtagtcggcggacgagagaagcgctatgcacgctg
ctgcgccgaacttctgctgccgaacaaaagtggctggtgagaatggttctgaaggagatg
aaaatgggcatgagcgaagggagtatcttgtcctgctatcatccggatgcgcaggacgtt
ttcgacaacagcagcagcctcacgaaagtctgtcgagaactgaaagacccgaaagttcgc
cagcacgtcgttcaggtctcgttgttccacgccgtgcgaccaatgttggccgagcgggca
gagcctcgctcggttgagcgtctcttgaatcacgagcccttctttgccgagaccaagttt
gacggtgagcggctgcaggtgcacaaggatggttctgagttcaggtacttcacacgacgc
agccatgactatagttctggtttcggagccactgctgatgagggatctttgacacagtac
atagccaaatctttccaaagccatgtcaagagttgtatcttagatggagaggtgatagga
tatgaccccaggagtgatcgtctcgtttcaaaaggttcgcatgtagatgtaaaaagttta
actgagaattcctcgttacaaccttgcttcgttgcctttgacatactcctcttgaacgga
caggtagtcaccaacaagcctcttcaagagagagttgtacttcttgatcaggctttagtg
gaggttcctggcagaatactgatctctagaaggcaaaatggttcaacacgggaagacgct
gttcgccttctgaaccgagcaatcgaagaccaagaagaaggcatagttttaaagaggctt
tcttcagtctacaaacctaatgctaggaaagctggctggctgaaactcaagccagaatat
gtggacaacttggtttcagatctggacatgcttattctcggtggttattttggagaagga
cgccgcagtggtgttgtgtcgcactttcttttgggagttacaagtggggatcaggacgac
gatggtatgccacgcactttctggtcggtcgcaaaggtgggctcggggtacagcttgcaa
gaactggacgacctacttgccaaactgacgtcgaaatggaaagtctataaccccaaaaag
cctccagaaaagttggtgcttgccccaggccacaaagaaaaaccagacttgtacctcgag
ccttcggactctgtggtgcttcagatcaaagcctcggaactcgttcgcagtagccagttc
aggacgggcataacattacgatttcctcgtgtagttgccatccgccatgataagccttgg
caggatgtgctgtcatattcagagctttgtgaactagagaaggcagcaggtggaaaattg
gccactgctacgctcgggcatgacgaggatgacggtggatctccagcaaaaaagaggcgt
gtcggaactagtgtaaaggcatctttaggtacacactttcagcctgccaatttgtctggt
gctgtaaagaagcgcaatattcttcggggaaaagagctgtgcatcttgactggctgtgga
gatctcaccaagcaggagctagaagtcaaggttgctgaattaggaggctctgttgtccaa
aatcccagcaaggaaacattttgtgttgttgcagagaagctaaacttcagagcacgtagt
tatgtcaaatcaaggaaatgggatgtcgttaaggcagacaagtttctcacacttctcgag
tctgccgagcttcggccatgggagccagcggacctgtggtgcgccagcaccgaaactgag
aaccgactgaaggatttgtttgatgaatatggcgacagctacacggttcctgtgacagca
agttctttgcgcaagatatttgcagccattcccaaagaggcatgtaaggaagttgatgac
ttaccggggttcatttttaagttcgagcaggagaattttgcctctcggccgcagtggggc
ttattcagaaactgcacattgaggctgagcgaggaaagtgaactaaataggttgattatt
agattgcatggtggtaaagttcaggacattccaggagaaggggaggctggtagttcagac
tgtgaaatgaatgacatggatgcttcggaagaagtgatggaggtagatagcgaatggata
gatgaatgcattcaagctggcgaactgcccctcttctag
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