KEGG   Rhipicephalus sanguineus (brown dog tick): 119400289
Entry
119400289         CDS       T07382                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
rsan  Rhipicephalus sanguineus (brown dog tick)
Pathway
rsan03030  DNA replication
rsan03410  Base excision repair
rsan03420  Nucleotide excision repair
rsan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119400289
   03410 Base excision repair
    119400289
   03420 Nucleotide excision repair
    119400289
   03430 Mismatch repair
    119400289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsan03032]
    119400289
   03400 DNA repair and recombination proteins [BR:rsan03400]
    119400289
Enzymes [BR:rsan01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     119400289
    6.5.1.6  DNA ligase (ATP or NAD+)
     119400289
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     119400289
DNA replication proteins [BR:rsan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    119400289
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     119400289
DNA repair and recombination proteins [BR:rsan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     119400289
   NER (nucleotide excision repair)
    Other NER factors
     119400289
   MMR (mismatch excision repair)
    Other MMR factors
     119400289
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 119400289
NCBI-ProteinID: XP_037523239
EnsemblRapid: LOC119400289
LinkDB
Position
7:complement(153759713..153792700)
AA seq 917 aa
MSQKKISSFFKTSTAPASKVAKEEPPQAVKKEPPEAVKEESEATASPSPEKDVNGHDTSP
VKAPTRRRIRMLTDSDEEEETVQKKSASDKNDELAAPSSSKSSPPAKTEEPVIVKRRTAR
KTAKRSPEPNRLSAESGTKRVKTEPTPEEEPSSEQVSSPQENKKVKAEPPASPKQEEMET
DTKPEADEKVEIKKEKEEKEEIEKKEKADDKKTTKASPPKKKEVKEEKPSAKSKSSSPKD
EKAKEKPKAEKKLQNFAFTTSGKSDKSSAASQVCDYNPDKANYDPVEDACWKKGAKVPYL
ALAITLDKIDGISGRLRIIEVLSNFLRSVLILSPDDLLSAVYLCLNKIAPDYQGLELGIG
ESLLVKALAEATGRTPDKVRAEAAAKGDLGLVAESSRSQQRVLFPPPPLMLSHVFTKLRA
IAEMTGNSVQQKKVDIIKVLLVACRQCEARFLVRSLGGKLRIGLAEASLLTALAHAAALS
PPHGDPKASKKRLEEAALLLKTAYCECPDYERIINALLEEGVDSLPKRCRLSPGIPLKPM
LAHPTKAIXRVLNRFEGSAFTCEFKYDGERAQIHLLEDGSVRIYSRNQEDNTGKYPEVVS
RIRAAISPDTKTCILDSEAVAWDRPSQTILPFQTLSTRKRKETTEEEVKVQVCVFAFDLL
YHNGESLVKEPLRKRRELLRKTLVEVPGETQLARSADLSTXEDIQEFLQESIKGSCEGLM
VKSLDTGATYEIAKRSHNWLKLKKDYLDGVGDSVDAVVLGGYHGKGKRTGTFGCFLLGCY
DPDNEEFQTLCKIGTGFSEEQLDQHSAFFKEHVIPAPKSYYRFDNSLAPDAWFEPCQVWE
IKSADLSVSPVHKAALGLVDPEKGISLRFPRFIRIRDDKNPEDATSAQQVADLYNKQDHI
KNKKAAVQETAADEDFY
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgtctcagaagaagatatcatcgttcttcaagacatcgacggctcccgcttcgaaagtc
gcgaaagaagaaccacctcaagccgtgaagaaagagccacctgaggccgtgaaagaagaa
tctgaggccactgcctcaccgtcacctgagaaagatgtcaacggtcacgacacctcaccc
gtcaaggctccaacgagaagacgcattcgcatgctcaccgacagcgatgaggaggaagag
acggtccagaagaaatcggcttcggacaagaacgacgagctggccgctccgtcgagcagc
aagtcttcaccgcctgccaagacggaggagcccgttatcgttaagcggagaacagctcgc
aagacggccaagcgaagccctgagccgaaccggctgtcggctgaatcgggcaccaaacga
gtgaaaaccgagccaactccagaggaagagccatcatctgaacaggtgtcttctccgcaa
gagaacaagaaagtcaaggccgagccacctgcatcgcctaaacaggaggagatggagacc
gacacaaaacctgaagcagatgaaaaagtagagataaagaaagaaaaagaagagaaggag
gaaatagagaagaaggaaaaagcagatgacaaaaaaactacgaaagcctcgcctccaaag
aagaaggaagtcaaggaagagaaaccatccgcaaagtctaagtcgtcttcaccaaaggac
gagaaagccaaagaaaaaccgaaggccgagaagaagctccaaaacttcgccttcaccacg
tctggaaagtcggacaagtcgtctgctgccagccaggtgtgcgactacaaccctgacaag
gccaactacgatcccgtcgaagacgcctgctggaagaagggtgccaaggttccctacctc
gcacttgccatcaccttggacaagatcgacggcatctcgggcagacttcgtatcatcgag
gtgttgagcaacttcctccgctcagtgctcatcctctcgcccgacgacctgctgagcgct
gtctacctctgcctcaacaagattgcgcccgactaccaaggccttgagcttggcatcggc
gaatcgctgctggtcaaggcgctcgccgaggccacgggccgcaccccggacaaagtgaga
gccgaagccgcagccaaaggcgacctgggcctggtggcagagagcagccgcagccaacaa
cgagtgctgttccctccgccgccgctgatgctgtcgcacgtgtttacgaagttgcgtgcg
attgcagaaatgacgggaaactcggtgcagcagaagaaggtcgacataatcaaggtcctt
ctcgtcgcctgccgccagtgcgaggcacggttcctcgtgcgctcgctcggtggcaaactg
cgcatcggtctagccgaggcttcgctgctgactgcactggcccacgcggctgccctctcg
ccacctcacggtgacccaaaagcatctaagaagcggcttgaagaagctgccttgctcctc
aagacggcttattgcgagtgtcccgactacgaacgcatcatcaacgccctgctcgaagag
ggcgtcgactcgctccccaaacgttgccggctcagtcccggcatcccattgaagcccatg
ttggcccacccgaccaaggccatcntcagggtgctcaaccgattcgaagggtcggcattc
acgtgcgagttcaagtacgacggcgagcgtgctcagatccacctcttggaagacggaagc
gtacgaatctacagccgcaaccaggaggacaacacgggcaagtatcccgaggtggtgtca
cgcattcgagcggccatctcgcccgacaccaagacctgcatcttggacagcgaggccgtc
gcctgggaccgcccctcccagaccatcctgccattccagacgttgagcactcgcaagcga
aaggagacgaccgaggaagaggtcaaggtgcaggtgtgcgtcttcgctttcgacctcctc
taccacaacggcgagtcgttggtcaaggagcccctgcggaaacggagggaacttctccgc
aagaccctcgtcgaggtgcccggcgagacgcagctggcacggtcggccgacctgtcgaca
ngtgaggacattcaggagttccttcaagagtccatcaaaggcagctgcgagggtctcatg
gtcaagtccttggacactggggccacgtatgaaatcgccaagcgctcccacaactggctc
aagttgaagaaggactacctagatggcgtcggtgacagtgtggatgcggtggtgctcggt
ggctaccatggcaagggaaagcgcacgggcacgtttggctgcttcctgctcggctgctac
gaccccgacaatgaggagttccagacgctttgcaagattggcaccgggttcagcgaggag
caactggaccagcattcggcctttttcaaggagcacgtaatcccagcacccaagtcgtac
taccggttcgacaacagccttgcgccagacgcgtggttcgagccctgtcaggtgtgggag
atcaagagtgccgacctctccgtctcgcccgttcacaaggcggcccttggattggttgat
cccgagaagggcatttccctgcggtttccccggttcattaggatacgagacgacaagaat
cctgaggatgccacttctgcccaacaggttgcagacttgtataacaagcaggaccacatc
aagaacaaaaaggcagctgtccaagaaaccgctgccgacgaagatttttattaa

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