Rhodoferax saidenbachensis: RS694_01475
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Entry
RS694_01475 CDS
T04623
Name
(GenBank) peptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rsb
Rhodoferax saidenbachensis
Pathway
rsb00550
Peptidoglycan biosynthesis
rsb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RS694_01475
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsb01002
]
RS694_01475
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsb01011
]
RS694_01475
Enzymes [BR:
rsb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RS694_01475
Peptidases and inhibitors [BR:
rsb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RS694_01475
Peptidoglycan biosynthesis and degradation proteins [BR:
rsb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RS694_01475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
APW41344
UniProt:
A0A1P8K5P3
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All DBs
Position
303590..304774
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AA seq
394 aa
AA seq
DB search
MKSFFTALLVTVCLGAAAQTPQAPEIAARSYLLLDVTANQILASKEIDTPVEPASLTKLM
TAYLVFDALKSKKIDIKQTMPVSERAWKMPGSRMFIDPKMQVPVDDLIKGMIVQSGNDAT
MALAEGVGGTAERFVEMMNAQAKLLGMKATGYKNPEGLTEAGHTTTARDLSILATRLMAD
FPEYVGIYAIKKYRYPGTPAANDSNRNLLLFRDPTVDGLKTGHTDAAGYCMVATAKRDFA
NLVTPGAPAGSPEATGSRRLLSIILGADSENARANESQKLLNWGYTAYEPVKLFDANQAV
ATPNVWKGSASTVKLGRPHSIVVAVPHGSAAKLKTQIIRAEPLVAPFARGQQVATLRVLA
GDQPVVDVPLLALEGVDQAGIFGRAWDAMRLWVR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattttttaccgctcttttggtcacggtctgccttggtgctgccgcacaaacg
ccccaggctccggaaattgcggcccgttcttacctgttgctcgatgtcacggccaaccag
atcctggcctccaaggaaatcgacacgccggtagaaccagcctcgctgaccaagctgatg
acggcgtatctggtctttgacgcgctgaagtccaaaaaaatcgatatcaagcaaaccatg
ccggtcagtgaacgcgcctggaagatgcctggatcgcgcatgttcatcgaccccaagatg
caggtgccggtggacgatttgatcaagggcatgatcgtgcagtccggcaacgacgccacc
atggcgctggccgaaggtgtggggggcacggctgaacggtttgtcgaaatgatgaatgcg
caggccaagctgctgggcatgaaggccaccgggtacaagaaccccgaaggcctgactgaa
gctggccacaccaccaccgcacgcgacctgagcatcctggccacccggttgatggcggat
ttcccggagtacgtggggatttacgccatcaagaaataccgctaccccggcaccccggcc
gccaatgacagcaaccgaaatctgctgctgttccgtgacccgacggtcgatggcctgaag
accggtcacaccgacgcggccggctactgcatggtggccacggccaagcgcgactttgcc
aatctggtgacgccgggtgctcccgccggttcgcccgaggccaccggaagccgccgcctg
ttgtccatcattctgggcgccgacagcgaaaacgcccgtgccaacgagtcccagaaactg
ctgaactggggctacaccgcctatgagccggtcaagttgtttgacgccaaccaagcggtg
gccacgcccaacgtctggaagggctcggcttctacggtcaagttggggcgcccccattcg
atcgtcgtcgctgtcccgcatggcagcgcggccaagctcaaaacccagatcatccgtgcc
gagcccctggttgcaccgtttgcccgtgggcaacaagtggcgaccttgcgggttctggcg
ggtgaccagccggtggtggatgtgcctttgctggcgctggaaggcgttgaccaggccggt
atctttggccgcgcatgggatgccatgcgtttgtgggttcgctaa
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