Ralstonia solanacearum CFBP2957: RCFBP_21337
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Entry
RCFBP_21337 CDS
T01272
Name
(GenBank) putative hemagglutinin-related autotransporter protein
Organism
rsc
Ralstonia solanacearum CFBP2957
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
TIG
Big_9
Cadherin_5
NtrZ
SprB
Motif
Other DBs
NCBI-ProteinID:
CBJ44511
LinkDB
All DBs
Position
3288530..3293548
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AA seq
1672 aa
AA seq
DB search
MRTLTQTILPGWRLLAGLSMLGHIGTCIRAGMRRSVLAMLALGACQMMLSSPVWAAACTV
SFSTTANTQKAYVFTSTNTSNCDPFLIGIAYDSAGDANSSSGPVVNTATTQGGTVAIYNG
SVPPSGDPNTNGFVYTPPTNFSGTDTATFYTSNDGVSWLPNGTLSITVTSTGPTVTGISP
SSGSTSGGTSVTVTGTGFTGATAVKFGSTNASSFTVNSATSITATSPAGSAGTVDLTVTT
SGGTSATSAADHFTYVAPPTANASSATVAHGSSSNAITLNITGGTPTSVAVSTAASHGTA
TASGTSITYTPTASYSGTDTFAYTATNAGGTSAPATVTITVSNATVSYAPSAPAGGTVGT
AYSQSVASASGGTSPYTYALASGSLPPGLSLSTGGTLSGTPTSSGGFSFAITATDSSTGT
GPFSATSGTLSLTVSAPTITLSPSSLTSATVGAASSQSVSASGGTSPYTYAITAGALPAG
MSLSSAGVLSGTPTAGGSFSFTATATDSSGGTGPYTGSRAYTLTVNAPTLSITPAAGSLS
ATGGVAYSQSFVAASGTAPYTYALAVNSGTLPTGLSFNTATGVLSGTPTTTGTVNFTVTG
TDSSTGTGPYTASAIYTLTTSAPTISLSPTTLSSVTVGTATSQSVTASGGASPYSYAVVS
GALPAGLSLNASTGALTGTPTAAGTFNFTVRGTDANAYSGTRSYSLTVAAPTIALSPTTL
AGATVSTAYSQSVTASGGTAPYTYAVTSGALPAGLSLSSAGTLSGTPTAGGSFSVTISAT
DSTTGTGPFTGSRAYTLSVGSPTLAITPASTAGLTAVAGSGYSQTFTASGGNSPYTYALT
VNSGTLPTGLAFNTGTGTLSGTPTTAGAVSFTVTATDSSSGSGPYAVSGTYTLTVSAPTL
TVAPATLPNPALGTAYSQTLTASNGTAPYTYAVTSGALPAGLSLSSAGVLSGTPTAGGSF
SFTATATDANSFTASRAYSFTIGAATIVLNPTTVPGATLNATYSQTLTASGGIGPYTYAV
ASGTLPAGMSLNGTTGVLSGTPTALGSSTVTIRATDSSTGTGAPYSGTRSYTLAVGQPLG
TAPPVTATTPSTTPVTLHPTANATGGPFSAVAIVTAPASGTAVVNGLDIVYTPTPTTSGN
VTFTFALVNTAGTSTPIQATVTVNAMPIAVTQKTASTAAGQAVNVDLTDGATGGPFTGAA
IVSVVPANAGTATIAQQTSQATAGIKPLAAAAPVYLLSFTPAGAFSGTATLTYTLSNAVA
TSTPAVVQVTVAPRRDPSTDPDVNGLINAQIQAARRFATTQIANYHQRLEALHGTGRAPS
GNGLTVALPSQRGDAQARCQDVFGIAARDACLRGDGTAGQPALARGKRNGETRNTTGNAD
AGPDLPGADATADTSQPDLAFWTAGTLDFGFANTSAQRSGFRFTTGGVTAGADYRVSDRL
SVGAGFGYGRDSTDIGNAGTKSTGDSYSLALYGSYRPLPTLFVDGVAGFGTLSFDSRRWV
SDANDYAMGSRNGHQIFASVSAGYEHRNNVWLISPYGRLSVSESTLDQFSETGPGLNALT
YFQQTVTTVSGTLGLRTEYAQKTRWGTFLPYARVEYQHDFNGQSNAGLAYADLASAGPAY
YVMGSPYGRDRMQVGLGTKFRTGPLTFGLDYSVMVGMGGLQQGVRLTFAAPF
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgctgacacaaacgatcctgcccggctggcgcttgcttgccgggttgtcgatg
ctcggccacatcggcacatgcatccgcgcggggatgcgacgaagcgtgctggcgatgctg
gcgctgggggcttgccagatgatgctgtcgtccccggtgtgggcggcggcgtgcacggtc
tccttctcgaccaccgccaatacgcagaaggcctacgtcttcaccagcaccaacacatcg
aattgcgatccgttcttgatcggcatcgcctacgactccgccggcgacgccaacagctca
agcggaccggtcgtcaacacggcgacgacgcagggcggcacggtcgcgatctacaacggc
tcggtaccgccgtcgggcgatcccaacaccaacgggttcgtctacaccccgcccaccaat
ttttccggcaccgacaccgccacgttctacaccagcaacgatggcgtcagttggctgccc
aacggtacgctgtccatcaccgtgaccagcaccggaccgaccgtgacgggcatctcgccg
tcctcgggcagcaccagcggcggcaccagcgtcaccgtgacgggcaccggcttcaccggt
gcgaccgccgtcaagttcggctcgaccaatgccagcagcttcaccgtcaacagcgccacg
tcgatcacggcaacatcgccggccggctcggcgggcacggtcgacctcaccgtcaccacg
tccggcggcaccagcgcgaccagcgcggccgaccacttcacctatgtcgcgccgcccacg
gcgaacgcgagcagcgccaccgtcgcccacggcagcagcagcaacgccatcacgctgaac
atcaccggcggcacgcccaccagcgtggccgtctcgacggccgccagccacggcacggcc
accgccagcggcacgtcgatcacctacacgcccaccgcgtcgtactccgggaccgacacc
tttgcctacacggcgaccaatgccggtggcacgtccgcgccggccacggtgacgatcacg
gtgtccaatgccacggtcagctacgcgccgtcggcgccggcgggaggcacggtggggacc
gcgtacagccagtcggtggcctccgccagcggcggcacctcgccctacacctatgcgctc
gcctccggctcgctgccgccgggtctgagcctgagcaccggcggcacgctcagcggcacc
cccacctcctccggcggcttcagcttcgcgatcacggccacagacagcagcaccggcacg
gggccgttctcggccaccagcggcacgctcagcctgacggtgtcggcgccgaccatcacc
ctgtcgccgagttcgctgacgagcgcgacggtcggggcggcctccagccagtccgtcagt
gccagtggggggacgtcaccgtacacctatgcgatcacggccggtgcgctgccggcgggc
atgagcctgtcgtcagccggcgtcctgtcgggaacacccacggcgggcggctcgttcagc
ttcaccgcgaccgccaccgatagcagcggcggcacgggcccctataccggcagccgtgcc
tacacgctcacggtcaacgccccgacgctgtcgatcacgcccgcggcaggcagcctgagc
gcgaccggcggcgtcgcctatagtcaatcgttcgtcgcggccagcggcacggcgccctac
acctatgcgctggcggtcaacagcggcacgctgccgaccggcctgtcgttcaacaccgcc
accggcgtgctgtccggcacgccgaccacgaccggcacggtcaacttcaccgtcacaggc
accgacagcagcaccggcacgggcccctatacggcctcggcaatctacacgctgaccacc
tccgcaccgaccatctcgctgtcccccaccacgctgtccagcgtcacggtcggcacggcg
accagccagagcgtgaccgccagcggcggcgcctccccctacagctacgctgtggtcagc
ggcgcgctgccggcggggctcagcctgaatgccagcacgggcgcgctcaccggcacgccg
accgccgccggcacgttcaacttcacggtgcgcggcaccgatgccaacgcctacagcggc
acccgcagctacagcctcaccgtggccgcaccaaccatcgcgctgagtccgacaacgctg
gccggcgcgacggtcagcacggcctacagccagagcgtgacggccagcggcggcaccgcg
ccgtacacctacgccgtgaccagcggtgcgctgccggccggcctgtcgctcagcagcgcc
ggcacgctgtcgggcacgccgaccgcgggcggcagcttcagcgtcacgatcagcgccacc
gacagcaccacgggcaccggcccgttcaccggcagccgggcctatacgctgagcgtcggc
tcgcccacgctggcgatcacgccggcgtccaccgccggactgaccgctgtcgccggctcc
ggctacagccagacctttaccgccagcggcggcaacagcccctacacctacgcgctgacg
gtcaattccggcaccctgcccaccggtctggcgttcaacaccggcaccggcacgctgtcc
ggcacgccgaccacggccggcgcggtgagcttcaccgtcaccgccaccgacagcagctcg
ggctcgggcccctatgccgtctccggcacgtacacgctgacggtcagcgctcccacgctg
acggtggccccggcgaccctgcccaacccggccctcggcacggcttacagccagaccctc
acggccagcaacgggaccgcgccatacacctatgcggtgaccagcggcgcgctgccggcc
ggcctgtcgctcagcagcgcgggcgtgctgtccggcacacccaccgcaggcggcagtttc
agcttcaccgccacggcaacggatgccaacagctttaccgccagccgcgcctacagcttc
accatcggcgccgcgaccatcgtactgaacccgaccaccgtgccaggcgccacgctcaat
gcgacctacagccagacgctcacggccagcggcggcatcgggccgtacacctacgccgtg
gcttccggaacgctgccggccggcatgagcctgaacggcaccaccggcgtgctgagcggc
acgcccaccgccctgggcagcagcaccgtcaccatccgggcaaccgacagcagcacgggc
accggcgcgccatacagcggcacgcgcagctacacgctcgcggtcgggcaacccctcggg
accgcaccgcccgtgaccgcgaccaccccatccaccacgccggtcacgctgcaccccacg
gccaacgcgaccggcggaccgttctcggcggtggcgatcgtgaccgcgcccgcgagcggc
acggccgtggtcaatggcctggacatcgtctacacgcccacgccgaccacctcgggcaac
gtcaccttcaccttcgcgctggtcaacacggccggcacctccacgccgatccaggcgacg
gtgaccgtcaatgccatgccgatcgccgtgacgcagaagacggccagcacggcagcgggc
caggccgtgaacgtcgacctcaccgacggtgccaccggcgggccgttcaccggtgcggcc
atcgtgtcggtcgtaccggccaacgccggcacagccaccatcgcacagcagacatcgcaa
gcgacggcgggcatcaagcccctcgccgcggcggcaccggtctacctgctcagcttcacg
ccggccggcgctttcagcggcacggccaccctgacctacacgctgtccaatgccgtcgcc
acctccacgccggccgtggtgcaggtcaccgtggcaccccggcgggatccgtccacggac
ccggacgtcaacggtctgatcaatgcgcagatccaggccgcgcgccgcttcgccaccacg
cagatcgccaactaccatcagcggctcgaagccctgcacggcaccggccgcgcaccgtcc
ggcaacggcctcacggtggcactgccgagccagcgcggcgatgcgcaggcgcgctgccag
gacgtcttcggcattgccgcccgcgacgcctgcctgcgcggcgatggcaccgccggccaa
ccggcgctcgcccgcggcaaacgcaatggagaaactaggaacaccacgggcaacgcagac
gccggccccgacctgcccggtgccgacgccacggccgacaccagccagccggacctcgcc
ttctggaccgccggcacgctcgatttcggcttcgccaacacgagcgcgcaacgctcgggc
ttccgcttcacgaccggcggcgtcacggcgggcgccgattaccgcgtgtccgatcggctc
tccgtgggggcaggcttcggctatgggcgcgactccaccgacatcggcaacgccggcacc
aagagcaccggcgacagctacagcctcgcgctctacggcagctatcgtccgctgcccacg
ctgttcgtcgatggcgtggccggcttcggcacgctgagcttcgattcgcgccgctgggtg
agcgacgccaatgactacgcgatgggctcgcgcaacgggcatcagatcttcgcttcggta
tcagcggggtacgagcaccgcaacaacgtctggctgatctcgccgtacgggcgcctgtcg
gtgtcggagtcgacgctggatcagttcagcgagaccggccccggcctcaacgcgctgacc
tacttccagcagacggtgacgaccgtgtcgggcaccctgggcctgcgcacggaatacgcg
cagaaaacgcggtggggcacgttcctgccctatgcccgcgtggagtaccagcacgacttc
aacggccagagcaacgccggcctcgcctatgcggacctggcgtcggcgggcccggcctac
tacgtgatgggcagcccgtacggccgcgaccgcatgcaggtgggcctgggcaccaagttc
cgcaccggcccgctcacgttcggcctggactacagcgtgatggtcggcatgggcgggctg
cagcagggcgtgcggctgaccttcgcggcgccgttctga
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