Cereibacter sphaeroides ATCC 17029: Rsph17029_2735
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Entry
Rsph17029_2735 CDS
T00484
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
rsh
Cereibacter sphaeroides ATCC 17029
Pathway
rsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rsph17029_2735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsh03400
]
Rsph17029_2735
DNA repair and recombination proteins [BR:
rsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rsph17029_2735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_2
HHH_5
UVR
GIY-YIG
HHH
GIY_YIG_2
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
ABN77837
UniProt:
A3PNC1
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All DBs
Position
1:complement(2876158..2878029)
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AA seq
623 aa
AA seq
DB search
MQDNETDGRDVPTGHAVIQGYLKTLDGSPGVYRMLDAQSQVLYVGKARNLRARVSNYARP
SGHSGRIARMIRETASMMFLTTRTETEALLLEQNLIKQLKPRYNVLLRDDKSFPNILIAK
DHPFPMLKKHRGKKSEKGSYFGPFASAGAVNRTLNQLQRVFLLRTCSDATFESRTRPCLL
FQIKRCSAPCVGRVPAEDYAELIGDAERFLQGRTTKVQANLAEQMQAASEAMEFERAAAL
RDRIKALTQVQSSQGINPRGVAEADVIAVHLEGGQACVQVFFIRANQSWGNRDFFPRTGA
GAEEPEILEAFLAQFYDDKEPPRMILLSHPVDNPDLVGQLLSERAGRKVTLGVPQRGEKA
ELVENAARNARESLARRMAESATQNRLLAGLAEAFELDAAPKRIEVYDNSHIQGTNAVGG
MIVAGPEGFLKSQYRKFNIRGAAGAQGDDFGMMKEVLTRRFERLLKEDPERKTDAWPDLL
LIDGGAGQVSAVQEILQELGVDDVPFIGVAKGIDRDAGKEEFHRPGEPPFALRMNDPVLY
FVQRLRDEAHRWAIGAHRAKRAKAVSATPLDEIPGVGAARKRALLAHFGSAKAVARAGVP
DLCAVEGISETMAQSIHDFFHGS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggataacgagacggacggccgcgatgtgccgaccggacatgcggtgattcagggc
tacctgaagacgctcgacggctcgccgggcgtctaccggatgctcgatgcccagagccag
gtgctctatgtgggaaaggcgcgcaacctccgggcgagggtgtcgaactacgcgcgcccc
tcgggccattccggtcgcatcgcccggatgatccgcgagaccgcctcgatgatgtttctc
acaacgagaacggagaccgaggccctcctgctcgaacagaacctcatcaagcagctcaag
ccgcgctacaacgtgctcctgcgcgacgacaagagtttcccgaacatcctgatcgccaag
gaccatcccttcccgatgctcaagaagcaccggggcaagaagtccgagaagggcagctac
ttcggtcccttcgccagcgccggcgccgtgaaccggacgctgaaccagcttcagcgggtc
tttcttctgcgcacctgctcggatgccaccttcgaaagccgcactcggccctgccttctc
ttccagatcaagcgatgctcggccccctgcgtgggccgggtaccggccgaggattatgcc
gagctgatcggcgatgccgaacgcttcctgcaggggcggacgacgaaggttcaggccaac
ctcgcggagcagatgcaggcggcctcggaggccatggaattcgagcgcgccgcggctctc
cgcgaccggatcaaggcgctgacgcaggtgcagtcctcgcaggggattaacccccgcggc
gtggccgaggccgatgtgatcgccgtccatctggagggcggtcaggcctgcgtgcaggtc
ttcttcatccgggcgaaccagagctggggcaaccgcgacttcttcccccgcaccggcgcc
ggggcggaagaaccggagattctcgaggccttcctcgcgcagttctacgacgacaaggag
ccgccgcggatgatcctgctctcgcatccggtggacaatcccgatctcgtggggcagctc
ctgtccgagagggcggggcgcaaggtgaccctcggggtgccgcagcggggcgagaaggcc
gagctggtcgagaatgcggcgcgcaatgcgcgcgaaagcctcgcccgccgcatggccgag
agcgccacgcagaacaggctgctcgcggggctcgccgaggccttcgagctcgatgcggcc
ccgaagcggatcgaggtctacgacaactcgcacatccagggcaccaatgcggtcggcggc
atgatcgtcgccggacccgagggtttcctgaaaagccagtatcgcaagttcaacatccgc
ggcgcggcgggggcacagggcgacgacttcggcatgatgaaggaggtgctgacccgccgc
ttcgagcgcctgctgaaggaggaccccgagcgcaagaccgacgcctggccggatcttctg
ctgatcgacggcggcgcggggcaggtctcggccgtgcaggagatcctgcaggagctgggg
gtggacgacgtgcccttcatcggcgtggccaagggcatcgaccgcgacgcgggcaaggag
gagttccaccgccccggcgagccgcccttcgcactgcgcatgaacgatccggtgctctat
ttcgtgcagcgcctgcgcgacgaggcccaccgctgggccatcggcgcccaccgggcgaag
cgggccaaggccgtcagcgccacgccgctcgacgagatcccgggggtgggggccgcgcgc
aagcgcgcgctgctggcgcatttcggctcggccaaggcggtggcccgggcgggcgtgccc
gatctctgcgcggtcgagggcatctcggagacgatggcgcagtccatccacgactttttc
cacgggagctga
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