Runella slithyformis: Runsl_1491
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Entry
Runsl_1491 CDS
T01553
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsi03009
]
Runsl_1491
Enzymes [BR:
rsi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Runsl_1491
Ribosome biogenesis [BR:
rsi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Runsl_1491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEI47916
UniProt:
A0A7U3ZIM6
LinkDB
All DBs
Position
1702223..1702945
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AA seq
240 aa
AA seq
DB search
MTKFDFKDLILFENEDYIVINKPPHVATINERTADKSVSILRMAKEYSFDAQVGHRLDKE
TSGALAIAKNPEAYRHLAMQFEHREVTKRYHAVANGLHDFDSISVFLPISPLKDGTAVKI
DRQKGKAAETVFFTLKAFRRHTLVECIPITGRMHQIRIHLQCLKAPIVCDPTYGGANVLL
STLKRDYKLKQETEERPIMQRVALHAFSLSFRLMNGETIKVEAPYPKDFAVLVKLLEKNS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatttgattttaaagatttgatattgtttgaaaacgaagattacatcgttatc
aacaaaccgccgcacgtagccacgatcaatgagcgcaccgccgacaagtcggtcagtatc
ctgcggatggcgaaagaatacagttttgatgcgcaggtaggacaccgcctggacaaagag
acctccggcgcattggccattgccaaaaaccccgaagcgtatcggcatttggccatgcag
tttgagcatcgcgaagtcaccaaacgctaccatgcggtggctaacggcctgcacgatttc
gacagcatttcggtatttttgcctatttcccccctcaaagacggcacagcagttaagata
gaccgtcaaaaaggcaaagctgccgaaaccgttttttttacgctcaaagcctttcgtcgg
cataccttggtggaatgcattcccatcacgggccgtatgcaccagatccgtatccactta
caatgcctcaaagcacccatcgtgtgcgacccgacctacggtggtgccaatgtgctttta
tctacgttaaaaagggattacaaattaaagcaggaaaccgaagaacgtcccatcatgcaa
cgggtggctctgcacgcattttcactttcgtttcggttgatgaacggcgaaaccatcaaa
gtagaagccccttatcccaaagactttgcggtattggtgaaattgctggagaagaacagc
taa
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