Runella slithyformis: Runsl_3996
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Entry
Runsl_3996 CDS
T01553
Name
(GenBank) Patched family protein
KO
K07003
uncharacterized protein
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Runsl_3996
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMPL
Sterol-sensing
Patched
ACR_tran
DUF5708
Motif
Other DBs
NCBI-ProteinID:
AEI50349
UniProt:
A0A7U4E7G3
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Position
4612532..4614847
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AA seq
771 aa
AA seq
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MWNKIAAGIIRFRFAWIALIFVTVAYMGYEGSKIELSYQMARILPPNDPTEKEYQRFRKI
FGEDGAIMVIGWQDPALFELSKFREWYGLAERIKAMKGIKNVLSLGHLYKVERNDSLSKF
EFKPLFTTLPSTQAEMDSLKSQVKKLPFYEGLAINSKTNSTLIVITFNDKDLNSSRRITI
VQDIKAMADEFSVKHKTDLHYSGMPFIRTVIMKKISGELKLFMALAVFVTAFILWLFFRS
IRLTLLSIGVVLMGVIFSVGLLQLFGYKITALTGLIPPLLIVIGVPNCVFLLNKYQLELK
THGNKEDAIREMVNQIGLSIFLANITTAIGFGVFYFTNSALLVEFGIVASICVMVTYVLC
LVLLPITLYYMDIPKPRHLKHLEGKWAKGFLNKIDFWVHNRRRTIYAAMVVVIIVSAYGM
TKIKAVGYIVDDLPQDDPVYVDLRFFESNFNGVLPFEVMIDTKQPNGVFGNQAQVLYKIK
ALQNELADFKEFSKPVSVVEASRFLYQAYRGGEARYYVLPGALELSKLTDYVQGDNRGVK
QLNSFMNEDRSITRVSFQMADVGSERIKDLLGKIRPKVDSIFNPSQYNVSLTGNSLVFLK
SNDYLLGNLYESLLIAIVLIALVGMVLFRSISIILLSKLPCLIPLALTAGIMGYFNIHFK
PTTILVFSITFGIASDGTVYFLTRYRQELYQRGRTASEAVTQAIFGTGLSMIYTAIILFC
GFSIFAASSFGGTAAMGVMVSITLLVAMCTNLILLPALLLSIAKRQKEKPA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtggaataaaattgctgcgggcattatccgttttcgatttgcatggattgcattgatt
tttgtgacagtagcctatatgggatacgaaggaagtaaaatcgaactttcttatcaaatg
gcccgtattctgccacccaatgaccccactgaaaaagaataccagcgtttccgaaaaata
ttcggcgaagacggtgccatcatggtgatcggatggcaagaccctgccctttttgaactt
tccaaatttcgggagtggtacggtctcgcagagcgtattaaggccatgaaaggaataaaa
aatgtcctttcgctgggccatttatacaaagtggagcggaatgacagcctgagcaaattt
gaattcaaaccgctttttaccacgctgccatctacgcaggcggagatggacagcctgaaa
agtcaggtaaaaaaacttcctttttacgaaggcttagccattaattccaaaacaaattct
accctgatcgttattacattcaatgacaaagacctgaattcatcgcgtcgaatcaccatc
gtgcaggatattaaggccatggcagatgagttttcggtcaagcataaaacagaccttcat
tattcgggaatgccgtttattcggaccgtgatcatgaaaaaaatatcgggggagttaaag
ctttttatggcgctggcggtgtttgtgacggcgtttatcctctggcttttctttcgttcg
atacggcttacgctcctgtcgatcggagtggtattgatgggggtgattttttcggtgggc
ctgcttcagttatttgggtacaagatcacggcattgacgggtcttattccgccgttattg
atcgtgatcggggttcccaactgcgtttttctgctgaacaaataccagttggaactcaaa
acccacgggaataaagaagacgctattcgtgaaatggtcaatcagatcggtctttccatt
tttctggccaacattacgaccgccattggttttggggtattttactttaccaatagtgct
ctgctggtagaattcggtattgtagcctcaatttgtgtcatggtcacgtatgtgctgtgt
ctcgtgttgttgcccattacactgtattatatggatattccaaagccccgtcatctcaaa
cacctggaaggaaagtgggcaaaagggtttctgaacaaaatagatttttgggtgcacaat
cgccgtcggaccatttatgcggccatggtcgtggtgattatcgtttcggcttatggcatg
accaagatcaaagcggtgggatatattgtggatgacctgccgcaagacgatcccgtctat
gtggatctgcggttctttgagtccaatttcaacggggtgctgccgtttgaggtcatgatc
gataccaaacaaccgaacggggtatttggaaatcaggcgcaggttctgtacaagatcaag
gcattacaaaatgaattagctgattttaaagagttttccaaaccggtttcggtcgttgaa
gcttcgcggtttttgtatcaggcatatcggggaggggaagcaaggtattatgtgttgccc
ggtgcattggaactgtcaaaactgaccgactatgtacagggagataaccgcggggtaaaa
caactcaattcgtttatgaacgaagaccgcagtatcacacgggtgagttttcaaatggcg
gatgtgggttctgagcggatcaaggacctgctgggaaaaattcgacccaaagtggattcc
atttttaacccttcccaatacaacgtcagcctgacaggcaacagcctcgtgtttctgaaa
agcaacgattatttattggggaatctctacgaaagcttattgattgccattgtgttgatc
gcccttgtagggatggtgctgttccgttcgatttccattattttgctgtccaaacttccc
tgtcttattccgctggccttgacggcgggtatcatgggctattttaacatccactttaag
cccaccaccattttggttttcagcattacgtttggcattgcctccgatggcacggtctat
tttttgacgcgctaccgccaggaactgtatcagcgcggacgcacggcctccgaagcggtg
acacaggccatttttggaacggggctgagcatgatctataccgccattattttattttgc
ggcttttctatctttgcggcatccagttttggcggtacggcggccatgggcgtgatggtt
tccatcacgttattggtagccatgtgtaccaatctgattctgctgcctgccctgttgctg
tctatcgctaaaaggcagaaagagaagcctgcgtag
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