Runella slithyformis: Runsl_4686
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Entry
Runsl_4686 CDS
T01553
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rsi
Runella slithyformis
Pathway
rsi00521
Streptomycin biosynthesis
rsi00523
Polyketide sugar unit biosynthesis
rsi00541
O-Antigen nucleotide sugar biosynthesis
rsi01100
Metabolic pathways
rsi01110
Biosynthesis of secondary metabolites
rsi01250
Biosynthesis of nucleotide sugars
Module
rsi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Runsl_4686
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Runsl_4686
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Runsl_4686
Enzymes [BR:
rsi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Runsl_4686
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEI51005
UniProt:
A0A7U3ZPJ8
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All DBs
Position
complement(5409991..5410542)
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AA seq
183 aa
AA seq
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MNITSTLLKDVYVITPAIYADERGHFFESFNELTWKKKGLPDSFVQDNQSFSTKGVLRGL
HFQTGEFAQGKLVRVIKGRVLDIAVDIRPDSPTFGKYEFFELDGETNTMVYIPEGFAHGF
VALEDSIFSYKCTAGYNKASEGGIIWNDPTLKIQWPITNPIVSDKDKELPTFESLFDTLK
AQG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcacctcaacgttattaaaagatgtctacgttatcactccggcgatttatgcc
gacgaacgtggtcatttctttgaatcatttaatgaattgacctggaaaaagaaaggcttg
cccgattcgtttgtacaggacaaccaatccttttcaaccaagggagtgttgagaggcctg
cattttcaaacgggagagtttgctcaggggaaattggtcagggtgatcaaaggacgggtt
ttggatattgccgtagatattcgacctgattctcctacttttggtaaatatgaattcttt
gaactggatggtgaaacaaataccatggtctatattccggaaggttttgctcatgggttt
gttgctttggaagacagtatttttagttataaatgtacggcgggttataacaaagcatct
gagggaggtattatttggaatgacccaacgctaaaaatacaatggcctattactaaccct
atcgtttcggataaggataaagagctgcctacctttgaatccctctttgatactttgaaa
gcacagggctga
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