Cereibacter sphaeroides KD131: RSKD131_1080
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Entry
RSKD131_1080 CDS
T00844
Name
(GenBank) Peptidoglycan-binding domain 1 protein precursor
KO
K21470
L,D-transpeptidase YcbB
Organism
rsk
Cereibacter sphaeroides KD131
Brite
KEGG Orthology (KO) [BR:
rsk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsk01002
]
RSKD131_1080
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rsk01011
]
RSKD131_1080
Peptidases and inhibitors [BR:
rsk01002
]
Cysteine peptidases
Family C82
RSKD131_1080
Peptidoglycan biosynthesis and degradation proteins [BR:
rsk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RSKD131_1080
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACM00940
UniProt:
B9KSD3
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All DBs
Position
1:1088689..1090245
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AA seq
518 aa
AA seq
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MALGAEAFANPPAAPVELTPFSRSVAGAAGRSELIAQFYADRSYRTLWTGPEDAARREAL
LTAIAEAPAHGLPVQRYDASALIARFRAARTEADRGRLEVAMTQALLAWAHDLHGGALEP
GKVDPGIKRAVKRLDPRSVLTAFEANPVHFLDSLAPRGPDYARLMRARLDLEATVAAGGW
GAAVPAGKLKPGATGPGFLALRDRLMAMGYLGRSTAASYDAEVAAAVRSFQTDHGLSPDG
VAGEGTIAALNVAPEARLKSILVALERERWLSIDRGERHIWVNLADFSTRLIDNGKVTFE
TRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKEYLPLLQRNPNAAGHLKLIDS
RGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVKFMFPNQWNIYLHDTPSKSLFDR
EVRAFSHGCIRLGRPFDFAYALLAAQTDDPEGLFQSHLSSGRESVVRLEKPVPVHLVYFT
AWAGPTGQMNYRDDIYGRDGVIFDALSEAGVVPGAVQG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctcggagcggaggctttcgcgaatcccccggcggccccggtcgagctgacgccc
ttcagccgctcggtggccggggccgcagggcggagcgagctgatcgcgcagttctatgcg
gaccggtcctaccggacgctctggaccgggcccgaggatgcggcccgccgcgaggcgctg
ctgacggccattgcagaggcaccggcgcacggattgccggtgcagcgctacgatgcctcg
gcgctgatcgcgcggttccgcgccgcgcggacggaggccgaccgcgggcggctcgaggtg
gcgatgacgcaggcgcttctggcctgggcgcacgatctgcatggcggcgcgctcgagccg
ggcaaggtcgatcccggcatcaagcgggcggtgaagcggctcgatccgcgcagcgtcctc
acggccttcgaggcgaacccggtgcatttcctcgacagtctcgcgccgcgcgggccggac
tatgcccggctgatgcgggcgcggctggatctcgaggcgaccgtcgccgcgggcggctgg
ggggcggcggtgcccgcgggcaagctgaagcccggcgccacggggccggggtttctcgcg
ctgcgcgaccggctgatggcgatgggctacctcgggcgcagcaccgccgcgagctacgat
gcggaggtggcggcagcggtgcggtcgttccagaccgaccatgggctcagccccgacggg
gtggcgggcgagggcaccatcgccgcgctgaacgtggcgcccgaggcgcggctcaagtcg
atcctcgtggcgctggagcgcgaacgctggctcagcatcgaccgcggcgagcggcacatc
tgggtcaacctcgccgacttctccacgcgcctgatcgacaacggcaaggtcaccttcgag
acccggtcggtgatcggcaaggacagcccggaccagcggacgccggaattctcggacgag
atggaatatatggtgatcaacccgtcgtggcatgtgccgcggtcgatcaccacgaaggaa
tatctgccgctcctgcagcgcaatccgaacgccgcgggccatctgaagctgatcgacagc
cggggccgcgaggtcagccgcggcgcggtgaacttcaacgcctacaatgcccggaacttc
cccttctcgatgcgccagccgccctcggacggcaatgcgctggggctggtgaagttcatg
ttcccgaaccagtggaacatctacctgcacgacacgccgtcgaagtcgctgttcgaccgc
gaggtgcgcgccttctcgcatggctgcatccgtctggggcggccgttcgacttcgcctat
gcgctgctcgccgcgcagaccgacgatcccgaggggctgttccagtcgcatctgtcgagc
ggcagggagagcgtcgtgcggctggaaaagcccgtgccggtgcatctggtctatttcacc
gcctgggccggacccacggggcagatgaattatcgcgacgacatctatggccgcgacggg
gtgatcttcgacgcgctgtccgaggccggggtggtgccgggcgcggttcagggctag
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