Ralstonia solanacearum PSI07: RPSI07_3268
Help
Entry
RPSI07_3268 CDS
T01273
Name
(GenBank) putative hemagglutinin-related autotransporter protein
Organism
rsl
Ralstonia solanacearum PSI07
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
TIG
Cadherin_5
NtrZ
SprB
Motif
Other DBs
NCBI-ProteinID:
CBJ52618
LinkDB
All DBs
Position
3393511..3398529
Genome browser
AA seq
1672 aa
AA seq
DB search
MRKLIPTILAGWRLLAGLSMLGHLGMHIRAGTRRSMQAMLVLGACQMMLSSPAWAATCTV
SFSTTANTQKSYVFTSTNTSNCDPFLIGIAYDSAGDANSSSGPVFNTATTQGGTIAIYNG
SVPPSGDPNTNGFVYTPPTNFSGTDTATFYTSSDGVSWLPNGTVSITVTSTAPTVTGISP
SSGSTSGGTSVTVTGTSFTGATAVKFGTANASSFTVNSATSITATSPAASAGTVDLTVTT
SGGTSATSAADQFTYVAPPSPSASSATVAHGSSSNAITLSIGGGTPTSVAISTAASHGTA
TASGTSITYTPNASYSGTDTFAYTASNAGGTSAPATVTITVSNATVSYAPSAPAGGTVGT
AYSQSVASASGGTSPYTYALASGSLPPGLSLSTSGTLSGTPTSAGTFSFTVTATDSSTGT
GPFAATSGTLNLTVSAPTISLSPSSLTSPTIGVASSQSLSASGGTAPYTYAITAGALPAG
LSLSSAGVLSGTPTAGGSFNFTATATDSTGGTGPYTGSRSYTLTVNAPTLSITPAAGSLS
ATSGVAYSQSFVAASGTAPYTYALSVNTGTLPTGLSFNTATGVLSGTPTTAGTVNFTVTG
TDSSTGTGPYTISATYTLTSSAPTISLSPTTLSGATVGAAYSQSVTASGGAAPYSYAVVS
GALPAGLSLNAGTGALTGTPTAAGTFSVTVRGTDANAYSGTRSYSLTVAAPTIALNPATL
ASATVSSAYSQSVTASGGTAPYTYAVTSGTLPAGLSLSSAGTLSGTPTAGGSFSFTISAT
DSTTGTGPFTGSRAYTLTVGSPTLTITPSSTAGLTAVAGSGYSQAFTASGGISPYTYALT
VNSGTMPTGLSFNTASATLSGTPTTAGAVSFTVTATDSSSGSGPYAVSGAYTLTVSAPTL
TVAPATLPNPAIGAAYSQTLTASSGTAPYTFAVTGGALPAGLSLSSAGGLSGSPTAGGSF
SFTVTATDANSFTASRAYSFTIGAATIALNPATVPGATLSTAYSQTLTASGGIGPYTYVV
ASGTLPAGMSLNSTTGVLSGTPTALGSSTFTIRATDSSTGTGAPYNGTRGYTLTVGQTIG
TAPPMAATTTSTTPVTLHPTANATGGPFSAVVIVAAPASGTAVVNGMDIVYTPTPTTSGN
VTLTFALVNTAGTSAPVQATVTVNAVPIAVAQKTASTAAGQAVNVDLADGATGGPFTGAA
IVSVAPANAGTAAIVQQTSQATAGVKALAAAAPVYLLSFTPASAFSGTATLTYTLSNAVA
TSTPAVVQVSVAPRRDPSTDPDVNGLINAQIQAARRFATTQIANYHQRLEALHGTGHAPS
GNGLTVALPSPRGDAQARCQDVFGIAARDACLRGDSTAGKPAFARGKRTTETRNDTGNAD
AGPDLPGADATADASQPDLAFWTAGTLDFGFANTSAQRSGFRFTTGGVTAGADYRVSDRL
SVGAGFGYGRDSTDIGNAGTKSTGDSYSVALYGSYRPLPTLFVDGVAGFGTLSFDSRRWV
TDASDFAMGSRNGHQVFASVSAGYEHRDNVWLISPYGRLSVSESTLDQFSETGAGLNALT
YFQQTVTTVSGTLGLRTEYAQKTRWGTFLPYARVEYQHDFNGQSNAGLAYADLASAGPAY
YVVGSPYGRDRMQVGLGTKFRTGPLTFGLDYSVMVGMGGLQQGVRLTFAAPF
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagctgataccaacgatcctggccggctggcgcttgcttgccgggttgtcgatg
ctcggccaccttggcatgcacatccgcgcagggacgcgacggagcatgcaggcgatgctg
gtgctcggggcttgccagatgatgctgtcgtccccggcgtgggcggcgacgtgcacggtc
tccttctcgaccaccgccaatacgcagaagtcctacgtcttcacgagcaccaacacgtcc
aactgcgacccgttcctgatcggcatcgcctacgattccgccggcgatgccaacagttcg
tccggaccggtcttcaacacggcgacgacgcaaggcggcacgatcgcgatctacaacggc
tcggtgccgccgtcgggcgaccccaacaccaacggtttcgtctacaccccgcccaccaat
ttttccggcaccgacaccgccacgttctacaccagcagcgatggggtcagctggctgccc
aacggcacggtgtccatcacggtgaccagcaccgcgccaaccgtgacgggcatctcgccg
tcctcgggcagcaccagcggcggcaccagcgtcaccgtgacgggcaccagcttcaccggc
gcgaccgccgtcaagttcggcacggcgaatgccagcagcttcaccgtcaacagcgccacg
tcgatcacggccacctcgcccgccgcgtcggccggcacggtcgatctcaccgtcaccacg
tccggcggcaccagcgcgaccagcgccgccgaccagttcacctacgtcgcgcccccctcg
cccagtgcgagcagcgccaccgtcgcccacggcagcagcagcaatgccatcaccctgagc
atcggcggcggcacgcccaccagcgtggccatctcgacggccgccagccatggcacggcc
accgccagcggtacgtcgatcacctacacccccaacgcgtcctactcgggtaccgacaca
tttgcctacacggcgagcaatgccggcggcacgtccgcgccggcaacggtgacgattacg
gtgtccaatgccacggtcagctacgcgccgtcggcgcctgcggggggcacggtgggcacg
gcgtacagccagtcggtggcctccgccagcggcggcacctcgccttacacctatgcgctt
gcctccggctcgctgccgccgggcttgagcctgagcaccagcggcacgctcagcggtacc
cccacctccgccggcaccttcagcttcacggtcacggccacggacagcagcaccggcacg
gggccgttcgcagccaccagcggcacgctcaacctgacggtgtcggcgccaaccatttcc
ctatcgccgagttcgctgacgagtccgacgatcggggtggcctccagccagtccctcagc
gccagcggcggcacggcgccctacacctatgcgatcacggccggtgcgctgccggcgggc
ttgagcctgtcgtccgccggcgtcctgtccgggacgcccacggcgggcggttcgttcaac
ttcacggcgaccgccaccgacagcaccggtggcacgggcccctacaccggcagccgcagc
tacacgctcacggtcaacgccccgacgctgtcgatcacgcccgcggcgggcagcctgagc
gcgaccagcggcgtcgcctatagccaatcgttcgtcgcggccagcggcacggcgccgtac
acctatgcgctgtcggtcaacaccggcacgctgccgaccggcctgtcgttcaacaccgcc
accggcgtactgtccggcacgccgaccacggccggcacggtcaacttcaccgtcaccggc
accgacagcagcaccggcacgggcccctacacgatctcggcgacctacacgctgaccagt
tccgcaccgaccatctcgctgtcccccaccacgctgtccggcgccacggtcggcgcggcg
tacagccagagcgtgacggccagcggcggcgcggccccctacagctacgccgtggtgagc
ggcgcgctgcccgcggggctcagcctgaatgccggcacaggcgcgctcaccggcacacca
accgccgccggcacattcagcgtcacggtgcgcggcaccgacgccaacgcctacagcggc
acccgcagctacagcctcaccgtggccgcgcccaccattgcgctgaatccggcgacgctg
gccagcgcgacggtcagctcggcctacagccagagcgtgacggccagcggcggcaccgcg
ccgtacacctatgccgtgaccagcggcaccctgccggcgggcctgtcgctcagcagcgcc
ggcacgctgtcgggcacgccgaccgcgggcggcagcttcagcttcacgatcagcgccacc
gacagcaccacgggcacgggtccgttcacgggcagccgggcctatacgctgacggtcggc
tcgcccacgctgacgatcacgccgtcgtccaccgccggactgaccgctgtcgccggctcc
ggctacagccaggccttcaccgccagcggcggcatcagcccctacacttacgcgctgacg
gtcaactccggcacgatgccgaccggcctgtcgttcaacacggcctctgccacgctgtcc
ggcacgccgaccacggccggggcggtcagcttcaccgtcaccgccaccgacagcagttcg
ggctcgggcccctatgccgtgtccggcgcgtacacgctgacggtcagcgcccccacgctg
accgtggccccggcgaccctgcccaacccggccatcggcgcggcttacagccagaccctc
acggccagcagcgggaccgcgccgtacaccttcgccgtcaccggcggcgcgctgccggcc
ggcctgtcgctgagcagcgcgggcgggctgtccggctcgccgacggcgggcggcagtttc
agcttcaccgtcacggcaacggatgccaacagctttaccgccagccgcgcctacagcttc
accatcggcgccgcgaccatcgcgctgaacccggccaccgtaccgggcgccacgctcagc
acggcctatagccagacgctcacggccagcggcggcatcggtccgtacacctacgtcgtg
gcctccggaacgctgccggccggcatgagcctgaacagcaccaccggcgtgctgagcggc
acacccaccgccctgggcagcagcaccttcaccatccgggcaaccgacagcagcacgggc
accggcgcgccatacaacggcacgcgcggctacacgctcacggtcgggcagaccatcggg
accgcgccgcccatggccgcgaccaccacgtccaccacgccggtcacgctgcaccccacg
gccaacgcgaccggcgggccgttctcggcggtggtgatcgttgccgcgccagcgagcggc
acggccgtggtcaacggcatggacatcgtctacacgcccacgccgaccacctcgggcaac
gtcaccttgacctttgcgctggtcaacacggccggcacctccgcgccggtccaggcgacg
gtgaccgtcaatgccgtgccgatcgccgtggcgcagaagacggccagcacggcggccggc
caggccgtgaatgtcgacctcgccgacggcgccaccggcgggccgttcaccggcgcggcc
atcgtgtcggtcgcaccggccaacgccggcacggccgccatcgtgcagcagacctcgcag
gcgacggcgggcgtcaaggcgcttgcggcagccgcaccggtctacctgctcagctttacg
ccggcgagcgccttcagcggcacggccaccctgacctacacgttgtccaatgccgtcgcc
acgtccacgccagcggtcgtccaggtgagcgtggcaccgcggcgcgacccctccacggac
ccggacgtcaacggcctgatcaatgcacagatccaggccgcacgccgcttcgccaccacg
cagatcgccaactaccatcagcggctcgaggccctgcacggcaccggccacgcaccgtcc
ggcaacggcctcacggtggccctgccgagcccgcgcggcgatgcgcaggcgcgctgccag
gacgtcttcggcattgccgcccgcgacgcctgcctgcgcggcgacagcaccgccggcaaa
ccggcgttcgcacgcggcaagcgcactacggagacccggaacgacacaggcaacgcggac
gccggtccagacttgccaggggccgacgccaccgccgacgccagccagccggacctcgcc
ttctggaccgccggcacgctcgatttcggcttcgccaacacgagcgcgcaacgctcgggc
ttccgcttcacgaccggcggcgtaacggcgggcgccgattaccgcgtgtccgatcggctc
tccgtgggtgcgggcttcggctacgggcgcgattccaccgacatcggcaacgccggcacc
aagagcaccggcgacagctacagcgtcgcgctctacggcagctatcgtccgctgcccaca
ctgttcgtcgatggcgtggccggcttcggcacgctgagcttcgattcacgccgctgggtg
accgacgccagcgacttcgcgatgggctcgcgcaacgggcaccaggtcttcgcttcggtg
tctgcaggatatgagcaccgcgacaacgtctggctgatctcgccatacggacgcctgtcg
gtgtcggaatcgacgctggaccagttcagcgagaccggcgccggcctcaacgcgctgacc
tacttccagcagaccgtgacgaccgtatccggcaccctgggcctgcgcacggaatacgcg
cagaaaacgcggtggggcacgttcctgccctatgcgcgcgtggagtatcagcacgatttc
aacggccagagcaacgccggcctcgcctatgcggacctggcatcggcgggccccgcctac
tacgtggtgggcagcccgtacggccgcgaccgcatgcaggtgggcctgggcaccaagttc
cgcaccggcccgctcacgttcggcctggactacagcgtgatggtcggcatgggcgggctg
cagcagggcgtgcggctgaccttcgcggcgccgttctga
DBGET
integrated database retrieval system
