Cereibacter sphaeroides 2.4.1: RSP_2966
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Entry
RSP_2966 CDS
T00284
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSP_2966 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_2966 (uvrA)
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSP_2966 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSP_2966 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND1
RsgA_GTPase
nSTAND3
DUF4350
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ABA79127
UniProt:
Q3J257
LinkDB
All DBs
Position
1:complement(1648064..1650922)
Genome browser
AA seq
952 aa
AA seq
DB search
MAEQKFISVRGAREHNLKGIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMGKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGT
PYSPATGLPIAAQQVQDMVDAVMAMPEGARGYLLAPIVRDRKGEYKKEFIELRKQGFQRV
KVNGTFHELEEPPTLDKKFRHDIDVVVDRIVVREGIETRLADSFRTALNLADGIAIFESA
PAEGEPVRTTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPECDGLGMELFFDERLVVP
DQGLTLKQGAIAPWAKSKSPYYTQTIEALARHYGFDPKKKWKDLPFNVQSVFLRGSGEEE
ITFRYDEGGRIYQVSRSFEGVIPNMERRYRETDSAWVREEFERYQNNRPCHVCGGYRLKP
EALAVKIGGLHIGQVVQMSIKEAFAWIETVPGHLTAQKNEIARAILKEIRERLGFLVNVG
LDYLSMSRAAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNL
RDQGNSVLVVEHDEDAIREADYVFDVGPGAGVHGGQVVAHGTPAEIAADPASLTGQYLSG
TREISVPAERRKGNGKALTVVKASGNNLHDVTVDFPLGKFVCVTGVSGGGKSTLTIETLY
KTAAMRLNGARETPAPCETIKGFEQLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWFA
GLPESKARGYQPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCETCKGHRYNRETL
EIRFKGKSIADVLEMTVEDAQEFFQAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEAQ
RVKLSKELSRRATGRTLYILDEPTTGLHFEDVKKLLEVLHELVEQGNTVVVIEHNLDVVK
TADWIIDIGPEGGDGGGKIVAEGTPEEVAKVEASHTGRYLRDMLKPRRLAAE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacagaagttcatctcggtgcgcggggcgcgcgagcacaatctcaagggcatc
gatgtcgacatcccgcgggatcagctggtggtcatcaccggcctgtcagggtcgggcaag
tccagcctcgccttcgacacgatctatgccgagggccagcgccgctatgtcgaaagcctc
tcggcctatgcgcggcagttcctcgacatgatgggcaagccggatgtggaccatatctcg
ggtctgtcgccggccatctccatcgagcagaagacgacctcgaagaacccgcgctcgacc
gtggggaccgtgaccgagatctacgactacatgcgccttctgtgggcgcgggtcggcacg
ccctacagcccggccaccggcctgcccatcgcggcgcagcaggtgcaggacatggtcgat
gcggtgatggcaatgcccgagggcgcgcggggctatctgctcgcgcccatcgtccgggac
cgcaagggcgaatacaagaaggagttcatcgagctccgcaagcagggcttccagcgggtg
aaggtgaacggcaccttccacgagctggaggagccgccgacgctggacaagaagttccgc
cacgacatcgatgtggtggtggaccggatcgtggtgcgcgaggggatcgagacgcggctg
gccgacagcttccgcaccgcgctgaacctcgccgacgggatcgcgatcttcgagagcgcg
cccgccgagggcgagccggtgcgcacgaccttctccgagaaattcgcctgcccggtctcg
ggcttcaccatccccgagatcgagccgcggctcttctcgttcaacgcgcccttcggcgcc
tgcccggaatgcgacgggctggggatggagctcttcttcgacgagcgtctcgtggtgccc
gatcaggggctcacgctgaagcagggggccatcgcgccctgggccaagtcgaaatcgccc
tattacacccagaccatcgaggcgctggcgcggcattacggcttcgatccgaagaagaaa
tggaaggacctgccgttcaacgtgcaatccgtcttcctgcgcggctcgggcgaggaggag
atcaccttccgctacgacgagggcgggcggatctatcaggtcagccgcagcttcgagggc
gtgatcccgaacatggagcgccgctaccgcgagaccgactcggcctgggtgcgcgaggaa
ttcgagcggtaccagaacaaccggccctgccatgtctgcggcggctaccggctgaagccc
gaggcgctggcggtgaagatcggcggcctgcacatcgggcaggtggtgcagatgtcgatc
aaggaggccttcgcctggatcgagaccgtgccgggccatctgaccgcgcagaagaacgag
atcgcgcgcgcgatcctcaaggagatccgcgagcggctgggcttcctcgtcaatgtgggg
ctcgactatctgtcgatgagccgcgcggccggcacgctctcgggcggggagagccagcgg
atccggctcgcctcgcagatcggctcagggctgacgggcgtgctctatgtgctcgacgag
ccctcgatcgggctgcaccagcgcgacaacgaccggctgctgaccacgctgaagaacctg
cgcgatcagggcaattcggtgctggtggtggagcatgacgaggatgcgatccgcgaggcg
gattatgtgttcgacgtgggtccgggcgcgggcgtccatggcgggcaggtggtggcgcac
ggcacgcccgccgagatcgccgccgatccggcgagcctcaccggccagtatctctcgggc
acgcgcgagatctcggtgcccgccgagcggcggaagggcaacggcaaggccctcacggtg
gtgaaggccagcggcaacaacctccacgatgtgacggtggacttccccttgggcaagttc
gtctgcgtgaccggcgtctcgggcggcggcaagtcgacgctgaccatcgagacgctctac
aagacggcggccatgcggctgaacggggcgcgcgagacgccggcgccctgcgagacgatc
aagggcttcgagcagctcgacaaggtcatcgacatcgaccagcggccgatcgggcgcacg
ccgcgctcgaaccccgcgacctacaccggggccttcacgccgatccgcgactggttcgcg
ggcctgcccgagtcgaaggcgcgcggctaccagccgggccggttctcgttcaacgtgaag
ggcgggcgctgcgaggcctgccagggcgatggcgtcatcaagatcgagatgcacttcctg
cccgacgtctatgtgacctgcgagacctgcaagggccaccgctacaaccgcgagacgctg
gagatcaggttcaagggcaagagcatcgccgacgtgctcgagatgacggtcgaggatgcg
caggagttcttccaggcggtgccttcgatccgcgagaagatggacgcgctgatgcgggtg
ggcctcggctacatcaaggtgggccagcaggcgacgacgctctcgggcggcgaggcgcag
cgggtgaaactctccaaggagctgagccgccgcgccacgggacgcacgctctacattctc
gacgagccgacgacggggctgcatttcgaggatgtgaaaaagctgctcgaggtgctgcac
gagctggtggagcagggcaacacggtggtggtgatcgagcacaatctcgatgtggtgaag
accgcggactggatcatcgacatcggcccggaaggcggcgacggcggcggcaagatcgtg
gccgagggaacgcccgaggaggtggccaaggtcgaggcctcgcacaccggccgctacctc
cgcgacatgctgaaaccccggcgtctggcggcggaatag
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