Rhodovulum sulfidophilum: NHU_04033
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Entry
NHU_04033 CDS
T04143
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rsu
Rhodovulum sulfidophilum
Pathway
rsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NHU_04033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsu03400
]
NHU_04033
DNA repair and recombination proteins [BR:
rsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NHU_04033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAQ71156
UniProt:
A0A0D6B814
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Position
4154942..4157602
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AA seq
886 aa
AA seq
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MSNTPSTVTPMMAQYLEIKSANPGALLFYRMGDFYEMFFDDAVAAAQALDIALTKRGKHQ
GEDIPMCGVPVHAAESYLLTLIRKGFRVAVCEQMEDPAEAKKRGSKSVVRRDVVRLVTPG
TLTEESLLEARRHNFLAAFAEVRGEAALAWVDISTGAFRAMGCPGVRLGAELARLAPREV
LLNEATERDWAEIVSESGAAVTPLSRASFDSSSAETRLTELFSVGTLEGFGTFSRAEMSA
MGALVDYLEITQKGKLPLLRPPVREAMGGTMQIDAATRRNLELTASLSGGREGSLLAAID
RTVTAAGARLLERRLSSPSRDLPTIHARLAAVRALVGDTGLCAALRDSLRKCPDIDRALS
RLGLDRGGPRDLAAIRNGLAQAGDVAGLLGDDLPQTLTGARAALTGHDELCDLLDRALVA
EPPLLVRDGGFIATGFDEDLDEARTLRDEGRGVIARMQAGFVEETGISSLKIKHNNVLGY
FIEVTATHAERMLSPPLSDTFIHRQTTANALRFTTVELSELETRILNAGNRALEIEKRLY
DSLKTAVLNHAGPAGQAAAALAEIDLATGLADLARGEDWCEPEVDDSRAFAVTGGRHPVV
ERALRRQGGTPFIANDCDLAEAGSGAAIWLLTGPNMSGKSTFLRQNALIALLAQAGSFVP
AASAHIGLVSQLFSRVGAADDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTAT
YDGLSIAWATLEHLHDANRCRALFATHYHEMTALTQKLSGVENATVAVKEWEGDVIFLHE
VRKGAADRSYGVQVARLAGLPDSVVERARVVLDALERGEREGGRSPSALIDDLPLFSAAA
IPQPSQSAPAGPAPLDERLSAIHPDELSPREALDLIYELKALARPE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatacgcccagcaccgtgacgccgatgatggcgcaatatctcgagatcaagtcc
gccaatcccggagcgctgctgttctaccggatgggcgacttctacgagatgttcttcgat
gacgccgtggctgcggcccaggcgctggacatcgcgctgaccaagcgcggcaagcatcag
ggcgaggacatcccgatgtgcggcgtgcccgtccatgccgccgaaagctatctgctgacg
ctgatccgcaaggggttccgggtcgcggtctgcgaacagatggaagaccctgccgaagcc
aagaagcgcggctcgaaatcggtggttcggcgcgacgtggtccgtctggtcacgccgggc
acgctgaccgaggaaagcctgctggaggcgcggcgccacaacttcctcgccgcctttgcc
gaggtccggggcgaggccgcgctggcctgggtcgacatctcgaccggcgcctttcgcgcg
atgggctgccccggcgtgcggctgggcgccgaactcgcacggctggccccgcgcgaagtg
ctgctgaacgaggcgacagagcgggattgggccgaaatagtctctgaatccggcgccgcg
gtcaccccgctgtcgcgcgcgagcttcgacagcagctcggccgagacgcggctgacagag
ctgttctcggtgggcacgctcgaaggcttcggaaccttctcgcgggccgagatgtcggcg
atgggcgcgctggtcgactatctggagatcacacagaagggcaagctgccgcttctgcgc
ccgccggtacgcgaggcgatgggcggcaccatgcagatcgacgccgcgacccggcgaaat
ctggaactgacggcaagcctttccggcggccgcgagggcagcctgctggcggccatcgac
cgaaccgtcaccgccgcgggtgcgcggctgctggaacggcgcctttccagcccctcgcgc
gatctgccgacgatccatgcgcggctggcggcggtccgggcgctggtcggggatacgggg
ctttgcgccgccctgcgcgacagcctgcggaaatgtcccgatatcgaccgggcgctgtcg
cggctcgggctcgaccggggcgggccgcgggacctggcggcgatccgcaacgggctggcc
caggccggagacgttgccgggcttctgggcgacgacctgccgcaaacgctgaccggggcg
cgggcggcgctgaccgggcatgacgagctttgcgatctgctcgaccgggctctggtggcc
gaaccgccgcttctggtccgcgacggcggtttcatcgccacgggcttcgacgaagacctg
gacgaggcgcgcacgctgcgcgacgagggccgtggcgtgatcgcgcggatgcaggcgggc
ttcgtcgaggaaaccggcatttcctcgctgaagatcaagcacaacaacgtgctgggctat
ttcatcgaggtcaccgccacccatgcagaacggatgctgtcgccgccgctgtcggatacc
ttcatccaccgccagaccacggccaatgcgctgcgtttcacgactgtcgagctgtcggaa
ctggaaacccgcatcctgaatgccgggaaccgggcgctggaaatcgaaaagcggctctat
gacagcctgaaaaccgccgttctgaaccatgcagggccggccggtcaggccgccgcggca
ctggccgagatcgaccttgcgaccgggcttgccgatctggcgcggggcgaggactggtgc
gagcccgaggtcgatgacagccgcgcctttgccgtgaccggcggtcgccatccggtggtc
gaacgcgcgctgaggcgtcagggcggcacccccttcatcgccaatgactgcgatctggca
gaggccggaagcggcgccgcgatctggctgctgaccgggcccaacatgtcgggcaaatcg
accttcctgcggcagaacgcgctgatcgcgctgctggcgcaggcgggcagcttcgtcccc
gccgcctcggcccatatcggactggtatcgcagcttttcagccgggtcggcgccgcggac
gatctggcgcgcgggcgctcaaccttcatggtcgagatggtcgagaccgccgcgatcctc
aatcaggccgacgaccgggcgctggtgatcctcgacgagatcggacgcggcaccgccacc
tatgacgggctgtcgatcgcctgggcgacgctggaacatctgcatgacgcgaaccgctgc
cgcgcgcttttcgccacccattaccacgagatgaccgcgctgacgcagaagctttcgggc
gtcgagaacgccaccgtggcggtcaaggaatgggaaggcgacgtgatcttcctgcacgag
gtccgcaagggcgcggcggaccgctcctatggggtgcaggtggcgcggctggcgggcctg
cccgacagcgtcgtcgagcgtgcgcgggtcgtgcttgacgccctagaacggggcgaacgc
gagggcggacgttcgccttcggccttgatcgacgatctgccgctgttctcggccgcggca
atcccgcagccgtcgcagtccgcccccgcaggcccggcgccgctggacgaacggctgtcg
gcgatccatcccgacgagctgagcccgcgcgaggcgctggatctgatctatgagctgaaa
gcgctggcccggccggaatag
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