Ruania suaedae: LQF12_03350
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Entry
LQF12_03350 CDS
T08275
Name
(GenBank) alginate lyase family protein
Organism
rsua
Ruania suaedae
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Gene cluster
GFIT
Motif
Pfam:
Alginate_lyase
TIG
Glyco_hydro_125
Phos_pyr_kin
Motif
Other DBs
NCBI-ProteinID:
UFU03657
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Position
733336..735909
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AA seq
857 aa
AA seq
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MSKMMARWRLLPLLLVALLAGAVMPAAASAAPGEDLSDSFETLQDHWLPVSGNWQVSDGA
AESSAVNDEHGHKLALFGHRLAGDGGVTVTFELTGKAGTSTWGGVSVHRAGVLDGYTTSG
YTALIRRNGEMAIIKADGGNGVTYLARTDTDARPGEGPVSLTFEVAGDLLSASVAGTTIT
ATDSSFRDGGVSIFAHRDTVVSVAQFEAEGLAPADDTVPLPEDCLPPSGDMTEPDRGDVL
ISDNRLGVIMNRLAQETGPQASAFERLMDDVAADVEREPFAPSVWFVPFFYNDPDGHREA
RDGLQEDANAAYRLALAYRLTGEAAYGESAASFVEAWTYDVECFRTSEDSALAFSYHFPA
MVFAADLLRETEVWSAAAEADFASMLRQQALEISSAIAGRGNNWGNWGVTLSTAIAAYLG
DDDLMGEQVERAREHIEGQIDADGHLSEEVTRNGGVGDYGIWYSHFSLLPALLTAEIAEP
HGYDLFSYENSHGLNLGDAVEILAGWVESPESFPYFDGPVEDLANVRTIDYLREVGVSAH
SMSHFEIAGSRYELPVVNRLLAVERPMTTIHAAPHLTLTHGDMSERSPEFDPRLVVSPAK
VDESALERGEVTVTGSGFAPDSEVVLSVNGTEAESKRTDNDGTVVFVLSGPLPIGEHVVA
VSAVEGSAEAQLEVVGDPDQTPGDVPSEEDLTPGTEGGIAVPASASEGAVITVSFSADLA
GERVELWIFSQPTYMGAHTVDANGTVSVALPEGIVGERRIAAYGAERNIIGWDRITVRAA
GGSDGGSGDDGSDNDAGDSSTDGLGASEETSEDDGVDGRGDLAETGFVGVGAAIAAIMAI
ASGVMLLRVRRQAGIGD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaatgatggcgcgatggcgcttgctacctctgctgctcgtagcgctcctcgca
ggggcggtgatgccggccgccgccagcgctgcacccggcgaggacctatccgacagtttc
gaaaccttgcaggaccactggttgcctgtctctgggaactggcaagtttcggacggtgcg
gctgaatcgagtgcggttaatgacgagcacggccacaaactcgctctcttcggccaccga
ttggctggagatggcggggtcactgtcactttcgagttgacagggaaggctggcacttcg
acgtggggcggagtcagcgtgcatcgggctggcgttctggacgggtacacgacatcggga
tacacggccttgattcgccgcaacggcgagatggcgatcatcaaagccgatggtggcaac
ggcgtcacctacctagcacgaactgacaccgatgcacgtcctggagagggacccgtaagc
ctgaccttcgaggtcgccggtgacctcctgagcgcgagcgtggctggtaccacaatcaca
gccacggactctagctttcgagacgggggagtgtcgatcttcgcccatcgggataccgtc
gtgtcagtcgcgcagttcgaggccgagggtctggcaccggccgacgacacggtgccgctt
ccggaagactgtctcccgccctctggggacatgacggagcccgatcggggagatgtactg
atctcggataaccgcctcggggtgatcatgaaccgccttgcgcaggagacgggcccccag
gcgagcgctttcgagcgactgatggacgacgttgccgcagacgtggagagagagccgttc
gcaccctcggtttggttcgttcccttcttctacaacgaccctgatggccaccgcgaagcg
cgtgacgggctgcaagaggacgctaacgcggcctatcgcctagctttggcgtaccgacta
accggcgaggctgcctatggagagagcgctgccagcttcgtggaagcgtggacatacgac
gtggagtgcttccgtacctcggaagactccgcgctggccttcagttaccacttcccagcg
atggtgtttgcggccgacctcctgcgcgaaacggaggtttggagtgccgcggctgaggct
gacttcgcctcgatgctgcgtcagcaggcgctcgagatctcttccgcgatcgctgggcgc
ggaaataattggggcaactggggtgtcaccctctccacggctatcgcagcgtatctcggt
gacgacgacctgatgggtgaacaggtcgagagagcccgagaacatatcgaaggccaaatc
gatgccgatggccatttgtccgaggaagtgactcgtaacggcggggtcggcgactatggc
atctggtactcgcacttctctttgctgccagctttgctcactgccgaaatcgcagaaccg
catggatacgatctgttctcctacgagaattcccacggtctcaacctcggcgacgctgtc
gaaattctcgcgggatgggtcgagtcccctgagtcctttccatacttcgacgggcccgtt
gaggatttggcaaacgtgcgtacgatcgactacttgcgcgaagtgggcgtgagtgcgcat
agcatgagccacttcgaaatcgcaggcagtcgctacgaacttcctgttgtgaatcggcta
cttgccgtagaacgtcctatgaccacgatccacgcggctccgcatttgaccctcactcac
ggtgatatgagcgagcggtcgcccgagtttgatccgcggctggtagtttctcctgcgaag
gtcgacgaatccgctttagagcgcggtgaggttaccgtcacaggctccggcttcgctcct
gattcggaggtcgttctttccgtcaatggaacagaagctgaatccaagcgtaccgataat
gatggcacagtggtattcgtgctatccgggcccttgccgatcggcgagcacgtagtggcg
gtttctgctgtggaaggcagtgccgaagcgcagctggaggtcgtcggtgatccagaccag
actccaggtgacgtgcccagcgaggaggacctgacgccgggaactgagggtggcatcgct
gtgcccgcatcggcgagtgagggagctgtgatcacggtgtccttcagtgctgaccttgcc
ggagagcgcgtagagctctggatcttcagccagccgacttacatgggcgcccacacggtg
gatgcgaacggcacggtctccgtcgccctacctgaaggcattgttggtgagcgcaggatt
gctgcctatggcgcggagcggaacattatcggttgggatcggatcactgttcgagccgct
ggtggtagcgatggaggctcgggtgatgacggttccgacaatgatgcaggcgactcgagc
acggatgggctaggcgccagtgaggagacctccgaggatgatggggtcgacggccgcggg
gatcttgcggagacggggttcgtcggggtcggtgctgccatcgcggccatcatggccatc
gcatccggcgtgatgctgctgagggtccggcggcaggccggaatcggcgactga
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