KEGG   Rhizoctonia solani: RhiXN_05720
Entry
RhiXN_05720       CDS       T09256                                 
Name
(RefSeq) Skp1 family
  KO
K03872  elongin-C
Organism
rsx  Rhizoctonia solani
Pathway
rsx04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    RhiXN_05720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rsx04121]
    RhiXN_05720
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_05720
Ubiquitin system [BR:rsx04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     RhiXN_05720
   Cul5 complex
     RhiXN_05720
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     RhiXN_05720
SSDB
Motif
Pfam: Skp1_POZ YhfC
Other DBs
NCBI-GeneID: 67027999
NCBI-ProteinID: XP_043180968
LinkDB
Position
6:join(824289..824303,824356..824461,824521..824572,824832..824958)
AA seq 99 aa
MTVSVDQEIVWVRITSEDGFSFLLDKRAVECSGTLKDMVDDSLGFTEAHSKTISLAYRAA
VVEKVVEYLNFRYLYKDTTKAQDIPDFSKRIPPEIVLEV
NT seq 300 nt   +upstreamnt  +downstreamnt
atgactgtgagtgttgaccaagagattgtttgggtccgaataacttcggaagatggcttc
tccttcttgctagacaagcgtgccgtcgagtgcagtgggacgctcaaggatatggtcgac
gactccctcggattcacagaagcccactcaaagacaatctcgttggcataccgtgcagcc
gtagtcgaaaaagtagttgaatacctcaacttcaggtacctctacaaggacacgaccaag
gctcaagacattcctgatttctccaagcggattccaccagagattgtattggaagtgtga

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