Ralstonia solanacearum UY031: RSUY_24390
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Entry
RSUY_24390 CDS
T06155
Symbol
hemD
Name
(GenBank) Uroporphyrinogen-III synthase
KO
K13543
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
rsy
Ralstonia solanacearum UY031
Pathway
rsy00860
Porphyrin metabolism
rsy01100
Metabolic pathways
rsy01110
Biosynthesis of secondary metabolites
rsy01120
Microbial metabolism in diverse environments
rsy01240
Biosynthesis of cofactors
Module
rsy_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RSUY_24390 (hemD)
Enzymes [BR:
rsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
RSUY_24390 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
RSUY_24390 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
HemX
FTCD_C
Selenoprotein_S
DUF4616
Motif
Other DBs
NCBI-ProteinID:
ALF88763
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Position
complement(2609668..2611653)
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AA seq
661 aa
AA seq
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MLVAALERHGLRTLQFPLLDIAPTPNLDDLRAALADPSRYALVVFVSPNAVQQAFAAMPE
GFRWPQDVPVAVVGPASAQALAAHGVEPPTHSVIRPDVHADDARQDSEALYARLDPAQLS
GREVLIVRGNGGREWLADRLREAGVAVRTVEAYRRSVPVPDAAAWAALREVLAGRHAWTL
TSSEAVRNLDSLARASLTAAEVDTLHAAPCFAPHARIVEQAQSLGFRDVTLTGAGDDRLL
AGLLAWAAPVAPVAEAVPSPAPAAAPAEPKPSSPAPIVSQTSVPSSVSAPGPAAASPGPA
AAPAAPTTTVSARSGRGNWLLWAALIVVLVVVAGLQLRNERLAREVRQRAQQNETLAQEM
RVLSRNDQDAFAQLQQKFGALDARTAETRDRQGALEQAAQDLLRNRDDWQRAEIERSLEV
ASEQLQLTGNVSSALVALQTIDARLASLDKPQFRAMRRAVARDIAKLKALPAIDLSGAAI
RLDDAINGIDALPLVSSALPLESQQAAQAPHGRSAKPAKVAAPASAPAAPVAAQTGWSAG
VRAWWGRLWHDVRHELGQIVQVRRVDQAEALLLSSDQAWFLRENLKLWLMNARLALLSRN
EAVFRADLGRADALLARYFDPQSPRVVAEQTLLQQARASVGTLEVPTLADSLAAARGQGK
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcgccgcgctggagcgccatgggctgcgcacgctccagtttccgctgctcgac
atcgcacccacgcccaacctggacgacctgcgcgccgcgctggccgatccgtcgcgctat
gcgctggtcgtgttcgtcagtcccaatgccgtgcagcaggcgtttgcggccatgcccgaa
ggcttccgctggccgcaggacgtgccggtcgcggtggtcggccccgccagcgcccaggcc
ctggccgcgcacggggtcgagccgcccacgcacagtgtgatccggcccgacgtgcatgcc
gacgacgcgcggcaggattccgaggcgctgtacgcgcgcctggacccggcgcagctgagc
ggccgcgaggtgctgatcgtgcgcggcaacggcggccgcgagtggctggccgaccggttg
cgcgaagccggcgtcgcggtgcgcacggtggaagcgtatcggcgcagcgtcccggtgccc
gacgccgcggcctgggccgcgctgcgcgaggtgctggccggccggcacgcctggacgctg
accagttccgaggcggtgcgcaatctcgacagcctcgcgcgcgccagcctgacggccgcc
gaagtcgatacgctgcacgccgcgccgtgctttgcgccgcacgcccgcatcgtcgaacag
gcgcagtcgctgggcttccgtgacgtgacgctgaccggcgcgggcgacgaccgcctgctg
gccggcctgctggcttgggccgctcctgtcgcgcctgtcgccgaggccgtgccgtcgcca
gcgcccgcggcggcgccggccgaaccgaaaccttcctcacctgctccgatcgtgtcgcag
acttccgttccttcgtccgtttccgcaccgggcccggccgccgcctcgccagggccggct
gccgcgcctgccgccccgaccacgaccgtcagcgcgcgctcagggcgcggcaactggctg
ctctgggccgcgctgatcgtggtactcgtggtcgtggccggcctgcagctccgcaatgag
cggctggcccgcgaggtccgtcagcgcgcgcagcagaacgagacgctggcacaggagatg
cgcgtgctgtcgcgcaacgaccaggatgcctttgcccagctgcagcagaagttcggcgcg
ctggacgcccgtaccgccgaaacgcgcgaccgccagggcgcgctcgagcaggccgcccag
gatctgctgcgcaaccgcgacgattggcagcgggccgagatcgagcgctcgctcgaagtc
gcatccgagcaattgcagctcaccggcaacgtgagcagtgcgctggtcgcactgcagacc
atcgacgcgcgcctggcctcgctcgacaagccgcagttccgcgccatgcgccgcgccgtc
gcccgcgacatcgccaagctcaaggcgctgccggccatcgacctgtcgggcgctgcgatc
cggctggacgatgcgatcaacggcatcgatgcgttgccgctggtgtcgtctgccttgccg
ctggaatcgcagcaggccgcgcaggcgccgcatggccgttccgccaagccggccaaggtt
gcggcgccggcttcggcaccggccgcaccggtggcggcgcagaccggctggtcggccggc
gtgcgcgcctggtggggccgcctgtggcacgacgtgcgccatgagctgggccagatcgtg
caggtgcgccgcgtcgaccaggccgaggcgctgctgctgtcgtccgatcaggcgtggttc
ctgcgcgagaacctcaagctgtggctgatgaacgcgcggctggcgctgctgtcgcgcaac
gaggcggtgttccgcgccgacctcggccgcgccgacgcgttgctcgcgcgctatttcgat
ccgcagtcgccgcgtgtcgtggctgagcagaccctgctgcagcaggcgcgcgcgagcgtc
ggtacgctggaggtgccgaccttggccgacagcctcgccgccgcccgcggccagggcaag
gagtga
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