Raphanus sativus (radish): 108809100
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Entry
108809100 CDS
T06014
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00052
Galactose metabolism
rsz00511
Other glycan degradation
rsz00531
Glycosaminoglycan degradation
rsz00600
Sphingolipid metabolism
rsz00604
Glycosphingolipid biosynthesis - ganglio series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108809100
09103 Lipid metabolism
00600 Sphingolipid metabolism
108809100
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108809100
00604 Glycosphingolipid biosynthesis - ganglio series
108809100
00511 Other glycan degradation
108809100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108809100
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
108809100
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108809100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
TgpA_N
Motif
Other DBs
NCBI-GeneID:
108809100
NCBI-ProteinID:
XP_056853794
UniProt:
A0A9W3CQN1
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MVKISRPSTGRHHLAFALLLALVAVGICVPVFALLPSLTSHQSLPRALTVTRDEKMMSRD
FYIKDDMFWKDENPFQIIGGDLHYFRVLPEYWEDRLLRAKALGLNTIQTYVPWNLHEPKP
GKFVFEGIADLVSFIKLCQKLDLLVMLRAGPYICGEWDLGGFPAWLLAVKPPLKLRTGDP
AYLKLVERWWNVLLPKVFPLLYSNGGPVIMVQIENEYGSYGNDKAYLCDLVTMATGHLGN
DIILYTTDGGTRETLEKGTIPLYDVYSAVDFSTGDDPWPIFELQKKFNAPGRSPPLSSEF
YTGWLTHWGEKIAKTDAEFTAASLEKILSRNGSAVLYMVHGGTNLGFYNGANTGSDESDY
KPDLTSYDYDAPIKESGDIDNPKFKALQRVIKKYSAAPHSITPSNKKRKAYGPIKMQRTM
SLFDLMSMTDPVDMITSANPISMESAGQMFGFLVYESSYISKKSGNILKIPKVHDRAQVF
VSCLSQDVDEGVLRYIGTTERWNDQPVSIPTTECTSDTSLFILVENMGRVNYGPYIFDEK
GILSPVYLDGQVLQGWKMIPIPFHNLNQMPNFSFEMQHTKNRSEPFELTNELGQKEPALF
AGEFSINSVEEIKDTYLSFNSWGKGVAFVNKFNIGRYWPSVGPQCNLYVPAPVLKPGKNY
VVIFELESPHVDLLLESVYQENFTCGSNESKVNQL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagataagcaggccatcaacaggaagacatcatttggcttttgcgttgcttctg
gctcttgttgctgtcggaatctgtgttcctgtcttcgctctccttccgtcactgacctct
catcagtctctgcctcgtgcgctaacagtaactcgagacgagaagatgatgtctcgggac
ttttatataaaagatgacatgttctggaaagatgagaatcctttccagatcattggtggt
gatttgcactacttccgagttcttcctgagtactgggaagataggcttctgagagccaag
gctttaggtctgaatactatacaaacgtatgttccttggaatctgcacgaaccaaagcct
gggaagttcgtctttgagggcattgctgatcttgtgtcctttatcaagctgtgtcagaaa
ctagatttgctggttatgctgcgtgctggaccttatatctgtggagaatgggatttaggc
ggttttcctgcttggttgcttgctgtgaaaccacctctgaaactcaggacaggagatcct
gcatatcttaagttggttgaaagatggtggaatgttttattgccaaaggtgtttcctctg
ctttacagcaatggcggtcctgttataatggttcagattgaaaatgaatatgggtcatat
ggaaatgacaaagcttatctatgtgatttagttactatggctacaggacacctggggaat
gatattattctgtatacaacagacggcggtacaagagaaacccttgagaaaggaactatc
cccttatatgatgtctactcagctgttgacttcagtacgggtgatgacccttggccaata
tttgaactgcaaaagaagtttaatgctccaggaagatcacctccactttcttcggagttc
tatactggttggcttacgcattggggtgagaagattgcaaaaacagatgccgaatttaca
gcagcttcccttgaaaagatattgtcccgaaatggctctgctgtgctatatatggtgcat
ggaggaacaaacttaggtttctacaatggagcaaatactggctctgatgaatctgactac
aaaccagatctgacttcctatgattatgatgctccaattaaggaatctggtgacatagat
aatccaaaattcaaagctctccagagagtgattaagaagtacagtgctgcgcctcactcc
attactccctccaataaaaaacggaaagcgtatggcccaatcaagatgcagaggacaatg
tctctgtttgatttgatgagtatgacagatcctgtagatatgatcacttccgccaaccca
atttcaatggaatctgctggacagatgttcggatttcttgtatatgaatcttcatacatt
tccaaaaagagtggaaatatactaaaaatacccaaggttcatgacagagctcaagtgttt
gtttcctgcctttcccaagatgttgatgagggagtactgagatacattggtacaactgag
agatggaacgaccaacctgtttctattccaactactgagtgtacctctgacactagctta
tttattctggttgaaaacatgggtcgtgtgaattacgggccatatatctttgatgagaag
ggtatcctgtctccagtttatctagatggtcaggttctccaaggatggaagatgatacca
attcctttccacaacttgaatcaaatgccaaatttcagtttcgagatgcaacataccaaa
aatagaagtgaaccgtttgagcttacaaatgaattgggtcaaaaagaaccagctctgttt
gctggtgagttctctatcaacagtgtagaagaaatcaaagacacttatctatcattcaac
agttggggtaaaggagttgcgtttgtcaataaattcaacatcggaagatattggccgtct
gttggaccacaatgcaacctctacgttcctgcaccagtccttaagcctggcaaaaattat
gtggtgatcttcgagttggaatctccacatgtcgaccttttgctggagtcggtgtatcag
gaaaacttcacatgcggttcaaatgaatctaaagtcaatcagttgtag
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