Raphanus sativus (radish): 108811881
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Entry
108811881 CDS
T06014
Name
(RefSeq) ABC transporter B family member 6
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108811881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108811881
04147 Exosome [BR:
rsz04147
]
108811881
04090 CD molecules [BR:
rsz04090
]
108811881
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108811881
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108811881
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108811881
CD molecules [BR:
rsz04090
]
Proteins
108811881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
Zeta_toxin
AAA_15
AAA_16
RsgA_GTPase
AAA_30
NB-ARC
Motif
Other DBs
NCBI-GeneID:
108811881
NCBI-ProteinID:
XP_018439491
UniProt:
A0A6J0JXS2
LinkDB
All DBs
Position
6:complement(50449507..50456198)
Genome browser
AA seq
1409 aa
AA seq
DB search
MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAENNGGGAGMATQAEEDEEMEE
QEEMEPPPAAVPFSQLFACADRFDWVLMVLGSVAAAAHGTALIVYLHYFAKIVQVLAYTA
ESGHRLPDDQFNRLVELSLTIVYIAGGVFVSGWIEVSCWILTGERQTAVIRSKYVQVLLN
QDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLVIGFVNCWEIAL
ITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYS
YATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWIGRFFVIHGRATGGEIITALF
AVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSGTNQEGTVLSGVEGNIEFRNVY
FSYLSRPEIPVLSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENI
KNLKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATPDQIEEAAKKARAHTFISSLEKG
YETQVGKVGLTLTEEQKIKLSIARAVLLDPKILLLDEVTGGLDFEAERVVQEALDLLMLG
RSTIIIARRLSLIRNADYIAVMEEGQLLEMGTHDELINLGNLYAELLKCEEATKLPRRMP
VRNYNDSAGFQPERDSSAGRGFQEPSSPKMAKSPSLQRGHNVFRPQEMYFNSEESPNDHS
PAPEKMGENGSSLDVADKEPTIKRQDSFEMRLPELPKIDIQCPQRQKSNGSDPESPISPL
LISDPQNERSHSQTFSRPHGHSDDTSANVMVAKDSQQKESPSVWKLAQLSFPEWLYAVLG
SIGAAIFGSFNPLLAYVIALVVTAYYTSKGSHLREEVDKWCLIIAGMGVVTVAANFLQHF
YFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSPDTLSMRLANDATFVRAAFSNRLSI
LIQDSFAVIVAILIGLLLGWRLALVALATLPVLTLSAIAQKLWLAGFSKGIQEMHRKASL
VLEDAVRNIYTVVAFCAGNKVMELYRLQLQRILKQSFLHGMAIGFAFGFSQFLLFACNAL
LLWYTAFSVHRGYMKLSTALTEYMVFSFATFALVEPFGLAPYILKRRKSLASVFEIIDRV
PTIEPDDTSALSPPNVYGSIELKHIDFCYPTRPEVLVLSNFSLKVNGGQTVAVVGVSGSG
KSTIISLIERYYDPVAGQVFLDGRDLKSYNLRWLRSHMGLIQQEPIIFSTTIRENIIYAR
HNASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTQGQKQRIAIARVVLKNAPIL
LIDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGKIVEEGT
HDALAGKNGLYVRLMQPHFGKGLRQHRLI
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgatggtctcacgaggcttattcggatggtctccgccgcacatacagcccttaaccccc
gtctcggaggtctccgagcctcccgagtctccctccccctacctcgatcccggagccgag
aacaacggcggcggcgcggggatggcgacgcaggcggaggaggacgaggagatggaggag
caggaggagatggagcctcctcccgccgccgttcccttctcccagctcttcgcctgcgct
gatcggttcgattgggtgctcatggtgctcggatctgtggccgccgctgctcatggcact
gcgctgattgtttacttgcactacttcgcgaagattgttcaggtgcttgcgtacacggct
gagtcggggcataggttacccgatgaccagttcaatcgccttgtcgagctttcgctgacc
attgtatacattgctgggggtgttttcgtatctggctggattgaggtgtcttgctggata
ctgactggagagaggcagactgctgtgattaggtcaaagtatgtccaagtactactgaat
caggatatgagtttctttgatacatatgggaataacggggatatagtaagccaagtgctg
agtgatgttcttctcattcagtccgctctaagcgaaaaagttggaaattacattcataac
atggcaacatttatcagtggtcttgttatcggttttgtcaactgctgggaaattgcgctc
attacgttagccactggtcctttcattgttgcggcaggaggaatatctaatatatttctc
cacagacttgctgagaatattcaagatgcttatgctgaagccgccagcattgctgaacag
gcggtctcgtacattaggacgttgtatgcctttacaaatgaaactcttgcaaaatactct
tatgcaacttctctccaagcaactctgagatatggtattttgataagtcttgtgcaagga
cttggacttggatttacttatgggcttgctatatgttcatgtgctctccaactttggatt
ggtcggttctttgttattcatggaagggcgactggtggagaaattattacagccctcttt
gctgttattttaagcgggctgggtttaaatcaagctgctacaaacttttattcatttgat
caaggaaggattgcagcatacaggctttttgagatgataagtcgttcatcatctgggact
aaccaagagggtactgttttgtctggcgttgaaggaaatattgagtttcggaacgtgtat
ttcagctatttgtcacgacctgaaattccagtattgagtggattttacctcaccgtgcct
gctaagaaagctgtcgcacttgttggtagaaatggttctggaaaaagcagcattattcct
ctaatggaacggttttatgatcctacactaggagaggttctacttgatggggaaaatatt
aaaaatctgaagttagagtggctgagaagccaaataggcctggtgacgcaggagcctgct
ttgcttagcttgagcataagagagaatattgcatatggccgggatgctactccggatcag
atagaggaggcagctaaaaaagctcgtgcgcacacatttattagctcacttgaaaaagga
tatgaaactcaggttgggaaggttggtttaacgctgacggaggagcagaaaataaaactt
tcgattgctagagctgtactcttagatccaaaaatactgctacttgatgaggtcactgga
ggactagactttgaagctgaaagagttgtccaagaagctcttgatcttctaatgttggga
cggtcaaccataataatagctcgacggttaagtctgataagaaatgctgactatattgct
gtaatggaagagggtcagctactcgaaatgggtacacatgatgaattaatcaaccttggt
aatttgtatgctgagcttctgaaatgtgaagaagcgacaaagctacccagacggatgcca
gttaggaactacaacgattctgctgggttccagcctgagagggattcttcagctggtcgt
ggcttccaagaaccatcatcacccaaaatggccaagtctccatcgcttcagagaggtcac
aatgttttccgcccccaggaaatgtactttaacagtgaagaatcacccaatgatcatagc
cctgctccagagaaaatgggagaaaatggctcgtctttggatgtcgctgataaggaacca
accattaaaagacaagatagttttgagatgcggttaccagaactaccaaaaattgacatt
cagtgtccacaacgtcagaaatcaaatggttcagatccggagtcccctatatcacccctt
ctgatatcagatccccaaaatgagcgctcccattcacagacatttagccgccctcatggt
cattctgatgacacttcagcaaatgtgatggtggccaaggactctcaacagaaggagtca
ccttcagtttggaagttagcacagcttagttttccagagtggctatatgctgtattagga
agtattggtgcggccatctttggttctttcaaccctcttttagcttacgtcattgcattg
gtagtgacggcgtactatactagcaagggaagccacctgcgtgaggaggttgacaagtgg
tgcttgatcattgctggtatgggagtagtcacagttgctgcaaatttcttgcagcatttc
tactttggtattatgggggagaaaatgacggagcgagtgcgaaggatgatgttctcagcg
atgctgcgtaacgaagttgggtggtttgacgaagaagagaatagtccagatacgctatcc
atgcgcttagcaaatgatgccacttttgtccgagctgccttcagcaacaggctttcgata
ctaattcaggatagttttgctgttatcgttgccattcttatagggttgctgctcggttgg
cgtttggcccttgttgcattggcaactttgccggtactaactctctctgccattgctcag
aaactttggcttgctggattctcaaagggcatccaggagatgcatagaaaggcgtctcta
gtactcgaggatgctgtcagaaacatatatactgttgttgctttctgtgccggtaacaag
gtgatggaactctacagactgcaacttcaacggatactcaagcagagctttctccacggg
atggctattggctttgcgtttggcttctcacagtttctcctcttcgcctgcaatgctctc
ctcctctggtacacggcattttcagttcaccgcggatatatgaagttgtcaacggcccta
accgagtacatggttttctccttcgctacatttgcccttgtcgagccattcggattagca
ccttacattctcaagcgccgcaagtctctcgcttcagtatttgaaatcatagatcgagtg
cctacaatcgaacctgatgatacctcagctcttagcccccctaacgtctatggaagcatt
gaactgaaacacatcgacttctgctacccaactcgcccggaagtgttggtactaagcaac
ttcagtctcaaagtcaacgggggacaaacagtagctgtggttggtgtttctggctctgga
aaaagcacaatcatatcattgatcgagagatactacgatccagtcgctggtcaggtcttc
ttagacgggagagacttaaagtcatataacttgagatggttaagaagccatatgggtctg
attcaacaagaacccataatattttccacgacgatcagagaaaacattatctacgcaagg
cataatgcgagtgaagctgagatgaaggaagctgcaagaatcgcaaatgcacaccatttc
atcagcagcttacctcacggttacgacacacatatcgggatgagaggtgttgaacttacg
caaggacagaaacagagaattgctatagctcgagtagtgctgaagaatgctccgatattg
ctgatcgatgaagcgagctcgtctattgaatctgagtcaagccgtgttgtgcaggaagct
cttgataccttgataatggggaacaaaacaacgattctgatagcgcatagagcggcgatg
atgagacacgtggataacattgttgttctcaatggaggcaaaatagttgaagaaggtacg
catgatgctttagcgggtaagaatggattgtatgtgcgcttgatgcaaccacattttggc
aaaggtctacgccaacatcgactgatctaa
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integrated database retrieval system
