Raphanus sativus (radish): 108812854
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Entry
108812854 CDS
T06014
Name
(RefSeq) ubiquitin domain-containing protein DSK2b
KO
K04523
ubiquilin
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108812854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108812854
03051 Proteasome [BR:
rsz03051
]
108812854
Membrane trafficking [BR:
rsz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108812854
Proteasome [BR:
rsz03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108812854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
Mod_r
CUE
TBK1_ULD
Dsc3_N
Ubiquitin_5
Ubiquitin_2
HOIP-UBA
RPN13_C
Rad60-SLD_2
UBX
Motif
Other DBs
NCBI-GeneID:
108812854
NCBI-ProteinID:
XP_018440732
UniProt:
A0A6J0JZ53
LinkDB
All DBs
Position
6:26326367..26329615
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AA seq
559 aa
AA seq
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MGGEGDSSQPLTAVDGGEGGGGDATVSVNVRCSNGSKFTVRTSLDSTVEAFKEVVAQNSE
VPANQQRLIYKGRILKDDQSLLSYGLEADHTVHMVRGSAPSSSPPPPSAPTTAPSVTRGV
GSNAGEALFPGLGFNPLGGGNAMSGGLFGAGLPDLEQAQQQLAQNPNMIRDMMNTPAIQN
LMNNPEFMRSMIMSNPQMRDLVDRNPELGHVLNDPSILRQTMEAARNPELMREMMRNTDR
AMSNIESMPEGFNHLRRMYENVQEPLMNATTMSGNAGNNAASNPFAALLGNQGVTAQGSG
APNNSTTPSAETGTGNGIPNANPLPNPWGATAGQTNAPGRTNSGGDTRSPGLGGLGGLGG
LGGLGGLGGLGMLGADSPLGATPDTAQLSQMLQNPAMSQMMQSLLSNPQYMNQLMNLNPQ
LRTMLDSNPQLREMMQNQDFLRQFISPEMMQQMMTLQQSLFSQNRNTTSQEPGQTGAAAA
GTGNNAGLDLLMNMFGGLGAGGLSGMNQSNVPPEERFATQLQQLQEMGFYDRAENIRALL
ATNGNVNAAVERLLGSIGQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaaggagattcgagtcagcctctgactgccgttgatggtggtgaaggagga
ggaggagacgccacggtctccgtcaacgtcaggtgctcgaacggatccaaattcaccgtg
aggacgagcctcgattccacggtggaagccttcaaagaggtggtcgcgcagaacagcgaa
gtcccagcgaatcagcagcgcttgatttacaaaggtcgcatcctcaaggacgatcaatct
cttctcagctacggtttggaggctgatcacaccgttcatatggttcgcggctctgctcca
tcttcatcacctcctcctccttctgctccgaccactgcacctagtgttaccagaggtgtt
ggttccaacgcaggagaagctttgttccctgggcttggttttaaccccttaggtggtggg
aatgctatgtctggcggcttgttcggagctggtctccctgatcttgagcaggcgcagcaa
cagctagctcaaaaccctaacatgattagagacatgatgaacacaccagccattcagaat
ctcatgaacaaccctgagtttatgaggagtatgattatgagtaaccctcagatgcgtgac
cttgtggaccgcaaccctgagcttggtcacgtgcttaatgaccctagcatccttaggcag
accatggaagctgcgaggaacccggagctgatgcgtgagatgatgcggaatactgatagg
gctatgagtaatattgagtctatgcctgaagggtttaatcatcttaggcgtatgtatgag
aatgttcaggagccgctcatgaatgcgactactatgtccgggaacgcgggaaacaatgcg
gcttctaatccttttgctgctcttcttggaaaccagggggttactgcacaagggagtggt
gctcctaataattctacgacgccgagtgctgaaacgggcactggaaatggtattccgaac
gcaaacccacttcctaatccttggggtgctactgctggccagacaaatgccccaggaagg
acaaattctggtggggatacgagaagccctggacttggtggtcttggtggacttggaggc
cttggtggccttggaggccttggtggactgggtatgcttggagcggattcacctcttggt
gccactccagatactgctcagttgagccagatgttgcaaaatccggccatgtcccagatg
atgcaaagcttactctcgaatccacaatacatgaaccagcttatgaatctcaacccgcaa
ctccgaaccatgcttgattcgaatcctcagttgagggaaatgatgcagaatcaagatttc
cttcgtcagttcatctccccggagatgatgcagcaaatgatgactctacaacaatcactt
ttctctcagaataggaatacgaccagccaggaaccggggcaaactggtgctgctgccgca
gggacaggcaacaacgcagggctggatttattgatgaatatgtttggcggtcttggtgct
ggcggcctgagtggcatgaaccagtccaatgttcctccagaggaacgcttcgcgactcag
ttgcaacagctacaagaaatgggattctatgacagagcagagaacataagggctttgctt
gcaaccaatggaaacgttaacgctgctgtagaacgactcttgggaagtattggccagtag
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