Raphanus sativus (radish): 108814333
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Entry
108814333 CDS
T06014
Name
(RefSeq) beta-hexosaminidase 3
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00511
Other glycan degradation
rsz00513
Various types of N-glycan biosynthesis
rsz00520
Amino sugar and nucleotide sugar metabolism
rsz00531
Glycosaminoglycan degradation
rsz00600
Sphingolipid metabolism
rsz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
rsz00604
Glycosphingolipid biosynthesis - ganglio series
rsz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
108814333
09103 Lipid metabolism
00600 Sphingolipid metabolism
108814333
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
108814333
00531 Glycosaminoglycan degradation
108814333
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108814333
00604 Glycosphingolipid biosynthesis - ganglio series
108814333
00511 Other glycan degradation
108814333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108814333
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
108814333
Chaperones and folding catalysts [BR:
rsz03110
]
Intramolecular chaperones
Others
108814333
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Glyco_hydro_10
Motif
Other DBs
NCBI-GeneID:
108814333
NCBI-ProteinID:
XP_018442381
UniProt:
A0A6J0K4I7
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Position
7:complement(9917867..9924232)
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AA seq
535 aa
AA seq
DB search
MRGIATKISGVAPLFLLFIAGAVSAFEDIEKLRIWPLPAEVNHGGRRMYLSEDFKLVTEG
SKYEDPSAILKEGFDRMLAVVRLSHVVSGHRNSSGSDGSSLLQGLHVIISSSTDELEYGA
DESYRLVVASQGKPSYAQLEAKSVYGALHGLQTFSQLCHFNMKKKVIEVLMTPWNITDQP
RFSYRGLLIDTSRHYLPLPVMKNVIDSMTYTKLNVLHWHIVDTQSFPLEIPSYPKLWNGA
YSPTQRYTFEDAAEIVNYAGRRGIHVLAEIDVPGHALSWGKGYPSLWPSKNCQEPLDVSS
DFTFKLIDGILSDFSKIFKFKFIHLGGDEVNTTCWSTTPRISKWLKKHRMTEADAYEYFV
LRAQKIASSHGYEIINWEETFNNFGNKLNPKTVVHNWLGTGVVGRVTAAGLRCIMSNQDK
WYLDHIDTPWQMFYANEPFEMIRDKKQQSLVLGGEVCMWGEHIDASDIEQTIWPRAAAAA
ERLWTPYTKLAENPDKVTTRLAHFRCLLNERGVAAAPLVGGGRVAPFEPGSCLAQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtatagccacaaagatctccggcgttgcgccgttgtttttgctattcatcgcc
ggggcagtctccgcctttgaggacatcgaaaagttaaggatttggccgttaccggcggaa
gttaaccacggtggccggagaatgtatctaagcgaagatttcaagcttgtgacggaggga
agcaagtacgaggatccttcagcgattttgaaagaaggattcgatagaatgcttgcagtt
gtgaggctgagccacgtcgtctccggccaccggaactcttcaggctccgacggatcttcc
ctgcttcagggactccacgtcatcatatcttcctccaccgatgagttggaatatggagca
gatgaatcgtacagattagtggttgcatcccaagggaagccgtcgtatgcacaacttgag
gcaaaaagcgtttacggtgcattgcatggcctacagacattcagccagttatgccatttt
aatatgaagaaaaaggtgatagaagttttaatgactccatggaatatcacagaccagccc
agattctcttaccgtggtcttttgatcgatacatcccgacattatttgccactacctgtt
atgaagaacgtaattgattccatgacatacaccaagctaaatgtgcttcattggcacatt
gtggacacacagtcatttcccttggagattccttcgtatccaaagctatggaatggcgct
tattctcccactcagagatacactttcgaagacgctgcagagatcgtcaattatgctggg
cgacgagggattcatgtcttggctgagattgatgttccaggacacgctctctcatgggga
aagggatatccttccttgtggccctccaaaaattgtcaagaaccacttgacgtgagtagt
gactttacattcaagctcatcgatggcattctctctgatttcagcaagatctttaaattt
aaatttatccacttgggaggtgatgaagtaaatacaacttgctggtctacaacaccgcga
atatccaaatggctaaaaaaacatcggatgactgaagcagacgcttatgaatatttcgta
ctgcgggcgcaaaagatcgcttcgtcacacggatatgaaatcatcaactgggaagaaacc
ttcaacaactttggaaacaaattaaacccgaaaacggtggtccacaactggcttggtaca
ggagttgttgggagagtgacggccgccggtttaaggtgcataatgagtaaccaagacaaa
tggtatttggaccatatagacacaccgtggcaaatgttttacgcgaacgagccgtttgag
atgataagggataaaaagcaacaaagtctagtacttggtggtgaagtgtgcatgtggggt
gaacatattgatgcttctgacattgaacaaacaatttggcctcgtgctgccgcagcagca
gagcggttgtggacaccctacacaaagttagctgaaaatccagacaaggtaactacgagg
ttggctcactttagatgcttgttgaatgaaagaggagttgctgctgcacctttggttggt
ggaggacgagtcgcgccttttgaaccaggttcatgtctcgctcagtaa
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