Raphanus sativus (radish): 108817661
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Entry
108817661 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108817661 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108817661
Membrane trafficking [BR:
rsz04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108817661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
108817661
NCBI-ProteinID:
XP_018445908
UniProt:
A0A6J0KEA8
LinkDB
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Position
7:2415000..2422981
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AA seq
1276 aa
AA seq
DB search
MVEPPVNSSSLGKMLLEEVSPVVMVLCTPLVEETFLKNGLSFVETLKPFCNFSNIDVPVR
TSGDQLYRLKRFTLRLFNASDIRQPNVEVAKQRLLHVITQAGEKVFHDLKSDPPQITDIL
SNPESEIAPTWFQYYNKELIRTLSFSDHEAFDHPVACLLVVSSKDEDPLNKFVDLFNTNR
LPSLLNDGIMDPKILKHYLLVHDNQDATTERTSKVLSEMRSTFGNNECNLLCTNSSKEGN
IEHQANPWASFKSSVPAEKLGCALTGDDIVEIKDLMQEFASRHIIPYMEQKVRDLNQQIS
ATRKGLRNQIKNLWWRKGKDDIPDSTKGSIYTYSSTESQIRILGDYAFMLHDYELALSSY
RLISTDYKLDKAWKHYAGVQEMMGLAYFISDQSIKEAEYCMENASSTYMQKLGKSGFQNA
TRCGLWWAEMLKARDQYKEAASVYFRICGEEPLHAAVMLEQASYCFVLTKPAMLHKYGFH
LVLSGDHYKICDQVNHAIRTYRSAISVYESTTWSHIKDHVYFHIGQWYAIVGMNDVAVRN
MLRVLDCGNQSKSTQEIFLRDFFNIVKKTGMKHEVVGLRLPVINMSSLQVIYEDHRTYAS
QASALVEESIWQSLEDDIIPSLNSGKSNWLELQSKLLPKKYKESNVCVVGESVKLDLEFR
NPLLISTSVTSVSLICELTANSDDLKLVDKEPSSLSLETEHNQVATSGFSSFTLSEVDFT
LGGGEKKLVRLTVTPSEEGILKIVGVRWELSGSIVGVHYFQSVPTKAKTNKARKKNKLTP
TDALKFLVIKSLPRLEGSIDHLPEKLYAGDLRYLVLELKNSSESPIKNLKMKISHPRFVN
PESHEEELTPGFPDCLRKGHEQNTVQRVTSRTSVFAFPKDVSLQGDRSLRWPLWLRAATP
GTISLYFTIYYEMENVSSIMKYRTLRMHYNLKVLPSLETSFEITPSPSRLQEFLVRMDIV
NRANSESFEIDQLSTVGCRWGISLLQPVDTILPSKSLLPGQALSCFFMIKDCRKPGTEEE
KTMSIPLSQSDIKLITQDDDEKLFDIVNSPLASFHESERSFSGTSDPSSPDTVDFILISR
LAKSSNPSAVSDIPKILSHDSCHNRIKSSIPLSWSLDGPKTINHDFSTSLCEIKLKMVVR
NTSDGFLSVSINTIDGGLPDTSAPTPSSGNQSGWRYVPAITEEMKLTSDVMGSRLGKPPA
SMESSPPFIWSGSSSTKVKIQPLSTTEIPLQISVFSPGVYNLSSYTLIWEHENASSSTSS
GTCQGYPCYLTVLQSE
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccgccggtgaactcttcttcgctagggaaaatgctattggaggaggtgagt
ccagtggtcatggttctctgcacgcctctcgttgaagagactttcctcaagaatggtcta
tcctttgtggaaacgcttaagcccttctgcaacttcagtaacatcgatgttcctgttcgg
acctcaggcgatcagctttatcgtctaaagaggtttacgctgaggttgtttaatgcctca
gatatcagacaacctaacgtagaggttgcaaagcaacggctactacatgttattactcaa
gctggggagaaggtttttcacgatttgaaatctgaccctcctcaaattactgatatactc
tctaatccagagtctgaaattgcacccacatggtttcagtattacaataaagaacttatc
cgtaccttgtcgttttcagaccatgaagcgtttgatcatcctgtggcttgtctcttggtc
gtttcatcaaaagacgaagaccctttaaataaatttgtagatcttttcaataccaataga
ttaccttctctgcttaatgatgggatcatggacccaaagattttgaagcattacttattg
gtgcatgacaatcaagatgcaacaacagagagaacgtctaaagtcctgtctgagatgaga
agtacgtttggaaataatgaatgcaacttactttgcactaattcatctaaagaggggaac
atagaacaccaggctaatccctgggcttcatttaaatcaagtgtcccggctgaaaaactt
ggatgtgctcttactggcgacgatattgtggagatcaaagatctgatgcaagagtttgct
tccaggcatataattccatacatggagcagaaagtccgagatcttaatcaacagatttct
gcaacaaggaaaggacttagaaaccagataaagaacttatggtggagaaaaggaaaagac
gatattccggattcgactaaaggttctatctatacctatagctccaccgaatctcaaatc
agaattttgggtgactacgccttcatgttgcatgactatgaacttgcattgtctagctat
cgcttaatatcaactgattacaagctcgataaagcttggaagcactatgccggtgtccag
gaaatgatgggactcgcatatttcatctcagaccagtcaataaaggaagctgagtactgc
atggaaaatgcatccagcacttatatgcagaaacttgggaagtctggctttcaaaatgct
actagatgtgggctctggtgggcagagatgctaaaggctagagaccagtacaaagaagcg
gcttctgtttacttccgcatatgtggagaggaaccattgcacgctgcagtcatgttagag
caggcttcttactgcttcgtgttaactaagccagcgatgctacacaagtatggatttcat
ctagttctctcaggagaccactataaaatctgtgatcaggttaaccatgcaattcgtaca
tatagaagcgcgatctctgtttatgaatcaactacttggagccatatcaaagaccatgtt
tactttcatattggacagtggtatgcaattgtcgggatgaatgatgttgcagttagaaac
atgctcagagtactggactgtggaaaccagtccaagtctacccaagagatttttctcaga
gactttttcaacatagttaagaaaactggaatgaagcacgaggtggtgggacttcgacta
ccagttattaatatgtcgtctcttcaagttatatatgaagaccatcgcacttatgcatct
caagcttctgctcttgtagaagagagcatttggcaatcattggaggatgatatcattcca
tcgttaaactctggcaagtcaaactggttggagttacagtcaaagctactgcctaagaaa
tacaaggaatcaaatgtttgtgtcgttggagagtcagtgaaattggatctggagtttagg
aatccactgctaatctctacttccgttacaagcgtctctctcatctgtgaacttaccgca
aattcggatgacttaaaattggtagataaagagccaagtagcttaagcttggagaccgaa
cacaatcaggttgcaacctctggtttctcttctttcaccttgtctgaagtggacttcaca
ttaggcggaggcgagaaaaagttggtgaggctcacagttacccccagtgaagaaggtatc
ctcaaaattgtcggtgtaaggtgggagttgtctggctccattgtaggcgtgcattacttc
caatctgtgcctacaaaggcaaaaactaacaaagcaagaaagaaaaacaaacttactccc
actgatgccttgaaatttttggtcattaagagtctacccaggcttgagggttcaattgat
catctgcctgagaaattgtatgctggagatcttcgttatcttgttttagagttaaaaaat
agttcagaatctccaataaagaatcttaaaatgaagattagccatccaagatttgtaaat
cctgaaagtcatgaagaagagctgacacccggatttccagattgcttaaggaagggccat
gaacaaaatactgtccagcgtgtaacaagtagaactagtgtatttgcatttccaaaggat
gtatcactgcaaggagaccgatctttgaggtggcctctttggcttcgagctgccacccct
ggaacgatatctttgtatttcacaatatactacgagatggaaaatgtatcaagcatcatg
aagtatcgcaccctaaggatgcattataatttaaaggtattaccatctcttgagacctcg
ttcgaaatcaccccctctccatcaagattgcaagaatttcttgtgcgtatggatatcgtg
aaccgtgcgaattcagagtctttcgaaattgatcagttgtcaacagttgggtgtcggtgg
ggtatctcgttgcttcagcctgttgatacaatcttaccttccaagtctctacttcctggg
caagctttatcatgtttcttcatgattaaggattgcagaaaacccgggactgaagaagag
aaaaccatgtctattcctcttagccaaagcgacataaaactgattactcaggatgacgat
gaaaagctttttgatatcgttaactcacctttagcaagcttccatgaaagcgaaaggtca
tttagtggaacctcagatccgtcaagtccggatacggttgacttcattctaatatctcgc
ctagcaaaatccagcaatccatcagcagtgtcagatataccaaagattctgtctcacgat
tcatgtcataatagaatcaagagctcaatcccgctctcatggtcactagacggtcccaaa
accataaaccacgatttttcgacctccttgtgcgaaatcaaactaaagatggtagtcaga
aatacatctgatggatttttatctgtgagcatcaacaccattgatggcggcctaccagat
acatcagcaccaactccttcctctggaaaccaatccgggtggcgctacgtgccagccata
acagaggaaatgaaactaacttcagacgtcatgggaagccgcctgggcaaaccaccagct
tcgatggaaagctcgcctcctttcatatggtcaggttcaagttccactaaggtcaaaatc
cagccattgtccacaacagagatccccctgcagatatcggttttctctcctggtgtctac
aatctctcttcgtatacacttatatgggagcatgaaaacgcttcatcatcaacatcatca
gggacatgccaaggctatccttgttaccttactgttcttcagtctgagtga
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