Raphanus sativus (radish): 108817827
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Entry
108817827 CDS
T06014
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 25
KO
K17679
ATP-dependent RNA helicase MSS116, mitochondrial [EC:
5.6.2.7
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108817827
Enzymes [BR:
rsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108817827
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
108817827
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
108817827
NCBI-ProteinID:
XP_018446139
UniProt:
A0A6J0KGI6
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Position
7:complement(4800052..4803105)
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AA seq
562 aa
AA seq
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MTPDGPKSSSKRREIRAKHVKKLSSGEKDESENKRVPKREREGKSVEEDEPLIKKAASTI
AVETADNKPKTSDSYLSKTRFDQFPLSPLSLKGIQDAGFKTMTVVQEATLPIILKGKDVL
AKAKTGTGKTVAFLLPSIEAVIKSPPVSRDNRHPPIIVLVVCPTRELACQAAAEANILLK
YHSSIGVEVVIGGTKLPAEQRRMQKHPCQILVATPGRLIDHIDNTSGFATRLKGVKVLVL
DEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPDEVRQICHVALKQDHEFVNCVQEG
SGETHQKVTQMYMIASLDRHFSLLYALLKKHIADNSDYKAIIFCTTAMVTRLVADLLGKL
SLNVREIHSRKPQSYRTRVSDEFRKSKRIILVTSDVSARGVDYPDVSLVVQMGLPSDREQ
YIHRLGRTGRKGKEGEGVLLLAPWEEYFLSSVKDLPITKSTLPPIDHDAVKKVQKALSQV
EMTNKEAAYQAWLGYYKSQKKIARDTTRLVELANEFSRSMGLNTPPAIPINVIGKMGLKN
VPGLNVAPGFDKRPGKKNYRSR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgatggacccaaatccagtagcaagagacgagagattcgcgccaaacatgtg
aagaagctctcgagcggtgaaaaagatgaatcagaaaacaaaagggtaccaaagagggaa
agggaaggcaaatctgtcgaggaagatgagcctcttatcaagaaagcggcttccactatc
gctgtagagactgctgataataagccgaagacttcagattcttacttgtctaagacaaga
tttgatcagttcccactgtctcccttgtcgctaaagggtatccaggatgctggatttaag
acaatgactgtcgtgcaagaggctactctccctatcattctcaaaggtaaagatgtgcta
gctaaggccaaaacaggcactgggaaaaccgtagcatttctgcttccatcaattgaagct
gttatcaagtctccacctgtaagccgtgataataggcacccgccgattattgttcttgtg
gtatgccctactcgggaacttgcttgtcaagctgctgctgaagcaaacattttgctcaag
tatcactcttctattggtgttgaagttgtgattggaggcactaagcttcctgctgagcaa
aggcgtatgcaaaaacatccttgtcagattcttgtggctacacctggaaggctcatagac
catatcgacaacacttctggattcgcaactaggttgaaaggtgtgaaagtcctggttctt
gatgaagctgatcatctcttggacatgggtttccgaagagatattgagaggataattgcc
gctgttcctaagcagagacaaacttttttattttctgccacggtacctgatgaggtccgc
caaatatgtcatgttgctttgaaacaagatcatgagttcgtcaattgcgttcaagagggt
agtggggagactcatcaaaaggtcacacaaatgtacatgattgcatcactggatagacat
ttctcgcttctatatgcgctccttaaaaaacacatcgcggataattcagactataaggcg
attattttctgtacaactgctatggttacaagattggtggctgatctgcttggtaaacta
agcctgaacgtcagagagatccactctagaaaacctcagagttacagaaccagagtttct
gatgagttccgcaagtccaagcgtattatccttgtaacatctgatgtatctgctcgtggt
gtagattaccctgatgtctcactagtcgtacagatggggttgccatcagacagagaacaa
tacatacatagacttggcagaaccgggaggaaaggtaaggaaggggaaggtgtacttttg
ttggcaccttgggaagagtactttctgtcatctgtcaaagacttgcccatcaccaagtct
actttgccgccgatagatcatgatgctgtgaagaaggtgcagaaagcgcttagccaagtg
gaaatgacgaacaaggaggcggcatatcaggcatggttgggttactacaaatctcagaag
aagattgcaagagacacaaccagactagtggagttagccaatgagtttagccggagtatg
ggactcaacacccctccagctatccctataaatgttattggcaagatgggtctcaaaaac
gttcctggtcttaatgtcgctcccggttttgacaagagaccagggaaaaaaaattatcgt
tccaggtag
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