Raphanus sativus (radish): 108821445
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Entry
108821445 CDS
T06014
Name
(RefSeq) syntaxin-125
KO
K08486
syntaxin 1B/2/3
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108821445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108821445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108821445
Membrane trafficking [BR:
rsz04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108821445
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108821445
Exosomal proteins of other body fluids (saliva and urine)
108821445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Erp_C
Syntaxin-6_N
Syntaxin_2
CD225
CCDC-167
Helo_like_N
DUF1664
LMBR1
MCPsignal
Motif
Other DBs
NCBI-GeneID:
108821445
NCBI-ProteinID:
XP_018449987
UniProt:
A0A6J0KPV3
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Position
8:1870941..1872147
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AA seq
298 aa
AA seq
DB search
MNDLFSNSFKRNQAQFGDVEAGQETMNLDKFFEDVENVKDDMKGVETLYKKLQDSNEECK
TVHNAKKVKELRAKMDADVGQVLKRVKMIKQKLEALEKANANSRNVPGCGPGSSTDRTRS
SVVSGLGKKLKDLMDSFQSLRARMNDEYKETVERRYFTITGEQADEQTIDNLIASGESEN
FLQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIE
SHVAKASSFVRRGTDQLQDAREYQKSSRKWTCYAIILFIVVFILLLIPALPHIMLMLK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctattctcaaattcatttaagaggaaccaggctcagttcggcgatgtggaa
gcaggtcaggaaacgatgaacctcgacaagttcttcgaggacgtcgagaatgtgaaagat
gacatgaaaggagtcgagactctttacaagaagcttcaagactccaacgaagaatgcaaa
accgtgcacaatgccaagaaggttaaggagctacgagctaagatggatgcggacgtaggt
caggtccttaagagggttaaaatgattaaacagaagctcgaggctctagagaaagccaac
gctaatagccgtaatgtcccgggttgtggacccggttcgtctacggataggactcggtcc
tctgtggttagcggtcttgggaagaagctcaaggatttgatggatagtttccaaagtcta
cgtgcacggatgaacgatgagtataaagagaccgtagagcgcaggtattttacaataaca
ggagaacaagcagacgagcaaacaatcgataacttgattgcgagcggtgagagcgaaaac
tttctccaaaaagcgattcaagagcaaggaagaggtcagatcatggacacgatatctgag
atccaagaaagacatgatgcagtgaaggagatagagaagaatctactcgagttgcatcaa
gttttcttggacatggcggctttggtggaagcgcaagggcaacagctgaacaatatagag
agccatgtggcgaaggcgagctcgtttgtgagaagagggactgatcagcttcaagacgcg
agggagtaccaaaagagctcgaggaaatggacttgttacgctattattctcttcatcgtt
gtgtttatccttcttcttattcctgctctaccccatattatgctcatgctgaaatga
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