Raphanus sativus (radish): 108822571
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Entry
108822571 CDS
T06014
Name
(RefSeq) ABC transporter B family member 11
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108822571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108822571
04147 Exosome [BR:
rsz04147
]
108822571
04090 CD molecules [BR:
rsz04090
]
108822571
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108822571
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108822571
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108822571
CD molecules [BR:
rsz04090
]
Proteins
108822571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_15
DUF87
AAA_24
nSTAND1
DUF815
AAA_7
AAA_30
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
108822571
NCBI-ProteinID:
XP_018451188
UniProt:
A0A6J0KUE8
LinkDB
All DBs
Position
8:70020..75370
Genome browser
AA seq
1278 aa
AA seq
DB search
MNREVAGEGDSVSHEPSTSKTPRQGEEEETKKDEKAKTVPFYKLFAFADSYDVLLMICGS
VGAMGNGVGLPLMTLLFGDLIDSFGQNQNNKDIVVVVSKVCVKFVYLGLGTLGAAFLQVA
CWMITGERQAARIRNMYLKTILRQDIGFFDVETNTGEVVGRMSGDTVLIQDAMGEKVGKF
IQLIATFIGGFALAFAKGWLLTLVMLTSIPLLAMAGAAMAIIVTKASSQGQAAYAKAATV
VEQTIGSIRTVASFTGEKAAINKYKKFITSAYKSGIQQGFSTGLGLGIMLFVLFSSYALA
IWFGGKMILEKGYTGGAVINVLIIVVAGAMSLGQTSPCVTAFSAGQSAAYKMFETIERKP
LIDAYDLKGKVLEDMRGDIELRDVHFSYPARPDEDIFDGFSLVIPCGATAALVGESGSGK
STVISLIERFYDPKAGQVLIDGVNLKEFQLKWIRSKIGLVSQEPVLFSSSIMENIAYGKE
KATIQEIKAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILL
LDEATSALDAESERVVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGSHS
ELVRDPEGAYSQLIRLQEINKDSKTLEADSGSSFRNSSLKKSIEGGSSSSVGNSSRHHSL
NVVASGLERGRSSHRAEQEDKTTGTESQEPVPKVSLTRIAAMNKPEIPVLLLGAVAAAVN
GAIFPLFGILISRVIEAFFKPAHELKNDSRFWALIFVALGVVSFIVSPAQMYLFAVAGGK
LIRRIRSMCFEKTVHMEVGWFDEPHNSSGNLGARLSADAALIRALVGDALSLAVQNAASA
ASGLIIAFTACWELALIILVMLPLIGINGYIQVKFMKGFTADAKSKYEDASQVANDAVGS
IRTVASFCAEEKVMHMYKKQCEGPIKDGIKQGFISGLGFGFSFFILFCVYAASFYAGARL
VEAGRTTFNDVFQVFFALTMAAIGISQSSSFAPDSSKAKVAAASIFGIIDRKSKIDSSDE
SGTVLDNVKGDIELRHISFTYPARPDIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLL
QRFYDPDAGHITLDGVELKKMQLKWLRQQMGLVGQEPVLFNDTIRANIAYGKGSEEAATE
SEIIAAAELANAHKFISSIQQGYDTVVGERGIQLSGGQKQRVAIARAIVKEPKILLLDEA
TSALDAESERMVQDALDRVMVNRTSVVVAHRLSTIKNADVIAVVKNGVIAEKGTHETLIK
IEGGVYASLVQLHMTASN
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtgaagttgccggagaaggcgactctgtttcacacgaaccttcaacttctaaa
actcctagacagggagaagaagaagagacgaagaaggatgaaaaggcgaagacagttccc
ttctacaagctatttgcatttgcagattcatatgatgttctcttgatgatatgtggttca
gttggagctatggggaacggtgttggtttgcctctcatgacattgttgtttggtgatctc
attgattcctttggtcagaatcagaacaacaaagacatcgtcgttgttgtctcaaaggtt
tgtgtgaaattcgtctaccttggacttggaacactaggagcagcctttcttcaggtggct
tgttggatgataacgggagagagacaagcggcgaggataaggaatatgtatctgaaaaca
attctgagacaagacattggattcttcgatgtggaaacaaacacaggggaggttgttggt
agaatgtctggtgatactgttcttattcaagacgccatgggtgagaaggttgggaagttt
attcagttgatagctacgttcataggtggatttgcattagcttttgcaaaaggatggtta
ttaacattggttatgttaacttcgattcctctcctggcaatggctggtgcagccatggcg
attatagtcactaaagcttcttctcagggacaagctgcttatgcaaaagccgctactgtt
gttgaacagactatcggttccatccgaacggttgcatcattcacgggggagaaagcagcg
ataaacaagtacaaaaagtttataacatcggcgtacaaatcaggcatacaacaaggattc
tcgacagggttaggactgggaataatgctattcgtgttgttcagtagctatgctttggct
atttggtttggtggtaagatgattctcgaaaaaggctataccggtggcgctgtcatcaac
gtactcatcatcgttgtcgccggtgccatgtcgctgggacaaacatctccatgtgtaacg
gcattttccgcgggtcaatccgcagcgtataagatgttcgaaacgatcgaaagaaagcct
ttgatcgatgcttacgacttaaaggggaaggttcttgaagacatgagaggagatattgaa
cttagagacgtgcatttcagctatccagctaggcctgatgaagacatcttcgacgggttc
tctctggttatcccttgcggcgctacagcagcgttagtaggagagagcggaagtggaaaa
tcaacggtcatcagtctgatcgagaggttctacgatccgaaagcagggcaagtactcatc
gatggtgttaaccttaaagagtttcagctgaaatggatcagaagcaagatcgggttggtt
agccaagaaccggttctgttttcgtcgagcatcatggagaacatcgcctacgggaaagag
aaggcgacgatacaagagatcaaagccgcgacggagctggcaaacgcggccaagtttata
gacaagttgcctcaggggttggatacgatggttggagagcacgggacgcagctctctggt
ggacagaaacagaggatagctatcgctagagccattctcaaagatccgaggatattgctt
cttgatgaagcgacgagcgcgctcgacgcagaatccgaaagagtggttcaagaggctttg
gatagagtgatggttaaccggactacggtcatcgtggcgcatcggttaagcacggttagg
aatgctgatatgatagcggttatccaccgcgggaaaatggtggagaaaggatcgcattca
gagctggtgagagatcccgagggagcttactcgcagctcattcgtttgcaagagattaac
aaggactcaaaaacattggaggctgattcaggatcatctttccgcaactcgagtcttaaa
aaatcaatagaaggaggatcatcttcgtcggttggtaatagtagccgtcatcattctttg
aatgtagtagcctcaggactagaacgtggcagaagtagccaccgagcagaacaagaggat
aaaactactggaacagagagtcaagaaccggtcccaaaagtgtctctaacccgaatcgcg
gctatgaacaaaccggaaataccggttctccttctaggagccgtagcagcagcagtcaac
ggtgctattttccctcttttcgggattctgatatcaagagtcatcgaagctttcttcaaa
ccggcgcacgagttaaagaatgattcaagattctgggcgttaatatttgtagctcttgga
gtggtttccttcattgtctcaccagctcagatgtatctgttcgccgttgctggagggaaa
ctgattcgacgaatacgatcaatgtgttttgagaaaaccgttcacatggaggtcgggtgg
ttcgatgagccacacaactccagtggtaacttgggtgctaggctttccgctgatgcagct
ttgattagggctctggttggggacgccttgtccctagcggttcaaaacgctgcgtctgct
gcctctggattgatcatagcgttcactgcatgctgggaactggcgcttataatcttagtg
atgcttcctctgattggtatcaatggttatattcaagtcaagttcatgaaaggattcacc
gccgatgctaagtcaaagtacgaggatgctagtcaggtggcgaatgatgcggtggggagt
attagaacggttgcgtctttctgtgcagaggagaaggtgatgcacatgtataagaagcaa
tgcgaaggtcccataaaagacgggataaagcaaggtttcatcagcggattagggtttgga
ttctccttcttcattctgttttgtgtctacgccgcaagcttctacgctggtgctagactg
gttgaagctggcagaacaactttcaatgatgtcttccaggtgttctttgcattaacaatg
gcagcgattgggatttctcagtcgagttctttcgcaccggattctagcaaagctaaggtt
gcagctgcttccatcttcggaatcatcgatagaaaatccaagatagattcgagcgatgag
tcagggacagtcttggataacgttaagggagatatcgaacttcgtcacattagtttcact
tatccagcaaggcctgacattcaaatcttccgcgatctttgcttaaccattcgtgcagga
aagacggttgctttggtcggagagagtgggtcgggaaaatcgacggtgatctcgctgtta
cagagattctacgatccggatgccggtcatataactctagacggagttgagctcaagaag
atgcaactgaaatggttgagacagcaaatgggactggtgggacaagagcctgtcttgttc
aacgacaccatccgagccaacattgcttatggcaaaggaagcgaagaggccgcgactgag
tctgagatcatagccgctgcagaactcgccaatgcacacaaattcatctctagcatacaa
caaggctacgacacggtggttggagaaagagggattcagctatcaggaggacagaaacag
cgagtggctatagcacgggccatagtgaaagagccgaagatattgcttttggacgaagca
acgagcgctcttgatgcggaatcggaacgaatggttcaagacgcgcttgaccgagtgatg
gtgaaccgaacatcggtggttgtggctcacaggttatcgacaataaaaaatgcggacgtg
atagctgtggtgaagaacggagtgatcgctgagaaaggaactcacgaaacgttgatcaaa
atcgagggtggggtttatgcttcgcttgtgcagcttcacatgactgcttctaactga
DBGET
integrated database retrieval system
