Raphanus sativus (radish): 108823343
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Entry
108823343 CDS
T06014
Name
(RefSeq) ABC transporter B family member 11
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108823343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108823343
04147 Exosome [BR:
rsz04147
]
108823343
04090 CD molecules [BR:
rsz04090
]
108823343
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108823343
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108823343
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108823343
CD molecules [BR:
rsz04090
]
Proteins
108823343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
AAA_21
Zeta_toxin
RsgA_GTPase
AAA_15
ABC_ATPase
SbcC_Walker_B
AAA_25
AAA_30
nSTAND1
AAA_7
DLIC
Motif
Other DBs
NCBI-GeneID:
108823343
NCBI-ProteinID:
XP_018452062
UniProt:
A0A6J0KVW7
LinkDB
All DBs
Position
1:1376344..1381629
Genome browser
AA seq
1285 aa
AA seq
DB search
MNCEGSGEGDSGSHEPSTSKTPKEGEKEDTKKEKTDEKTKTVPFYKLFAFADSLDVFLMI
CGSVGAVGNGVCLPFMTLLFGDLIDSFGKNQNNKDIVDVVSKVCLKFVYLGLGTLGAAFL
QVASWMITGERQAARIRSMYLKTILRQDIGFFDVETNTGEVVGRMSGDTVLIQDAMGEKV
GKFIQLVSTFVGGFALAFVKGWLLTLVMLTSIPLLAMAGASMAIIVTRASSRGQAAYAKA
ATVVEQTIGSIRTVASFTGEKQAINSYKKFITSAYKQSIQQGFSTGLGLGVMFMVFFSSY
ALAIWFGGKMIVEKGYTGGAVINVIIIVVAGSMSLGQTSPCLTAFAAGQAAAYKMFETIK
RKPLIDAYDVNGKVLEDIRGDIELKDVHFSYPARPDEDIFNGFSLFIPSGSTAALVGESG
SGKSTVISLIERFYDPKSGEVLIDGVNLKEFQLKWIRSKIGLVSQEPVLFSSSIMENIAY
GKENATVEEIKAAAELANAAKFVDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPR
ILLLDEATSALDAESERVVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVERG
SHSELLRDPEGAYSQLIRLQEINKGQTSSEIASGSSFRASNLKKSMEGSSVLSGGTSSVG
NSSRHHSLNVLGLAAGLDFGGGSVSQRVGQEESVQEPVQKVSLTRIAALNKTEIPVLLLG
TVAAAINGAIFPLFGILISRVIEAFFKPADELKKDSRFWAIIFVALGVTSLIVSPVQTYL
FSVAGGKLIRRIRSMCFEKAVHMEVGWFDEPQNSSGTMGARLSADAALIRALVGDALSLA
VQNAASAASGLIIAFTASWELAFIILVMLPLIGINGYIQVKFMKGFTADAKTKYEDASQV
ANDAVGSIRTVASFCAEEKVMQMYKKQCEGPIKDGIKQGFISGLGFGVSFFILFSVYATS
FYAGARLVEAGRTTFNNVFQVFFALTMAAIGISQSSTFAPDSSKARVAAASIFGIIDRKS
KIDSSDESGTVLENVKGDIELRHISFTYPARPDIQIFRDLCLSIRAGKTVALVGESGSGK
STVISLLQRFYDPDSGNITLDGVELKSLQLKWLRQQMGLVGQEPVLFNDTIRANIAYGKG
SEEAATESEIIAAAELANAHKFISSIQQGYDTVVGERGIQLSGGQKQRVAIARAIVKEPK
ILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIAEKG
THEKLIRIEGGVYASLVQLHMTASN
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtgaaggctctggagaaggcgactctggttcacacgaaccctcaacttctaaa
actcccaaggaaggagaaaaagaagatactaagaaggaaaaaaccgatgaaaagacgaag
acagttccgttctacaagctatttgcatttgctgattcccttgacgtgttcttaatgatc
tgtggctctgttggagcggttgggaacggtgtttgtttacctttcatgacattgttgttc
ggtgatctcatagattcatttggaaaaaaccagaacaacaaagacattgttgacgtagtc
tcaaaggtttgtcttaaattcgtctaccttggacttggaaccctaggagcagcctttctt
caggtggcttcttggatgattacgggagagagacaagcagcgaggataaggagtatgtat
ctgaaaacaattctaagacaagacattggattctttgatgtggaaacaaacacaggagag
gttgttggtagaatgtctggagataccgttcttatacaagacgccatgggtgagaaggtt
gggaagtttattcagctggtatctacattcgtcggtggatttgcattagcttttgttaaa
ggatggttattaacattggttatgttaacttcaattcctctcctagctatggctggtgca
tccatggcgattatagtcactcgagcttcttcccggggacaagccgcttatgcaaaagca
gcaactgttgttgaacagaccattggttctatccgaacggttgcttctttcacgggagag
aaacaagccataaatagctacaaaaaattcataacttcggcctataaacaaagcattcaa
caaggcttctctactggtttaggactcggagtaatgttcatggtattctttagcagctat
gctttggccatttggtttggagggaagatgattgttgagaaagggtatactggtggcgct
gtgatcaacgtgatcatcatcgtggtcgctggttcaatgtcgctagggcaaacatctcca
tgtctaaccgcatttgcagcgggtcaagccgcagcgtacaagatgttcgagacgatcaaa
agaaagcctctgatcgatgcttacgacgtaaacggaaaggttctcgaagacatacgagga
gacatcgaactcaaagacgtgcatttcagctaccctgcgagaccagacgaggacatattc
aacggtttctccctgttcatccccagcggctcaacagcagcgttagtaggagaaagcgga
agcgggaaatcaacagtgatcagcttgatcgagaggttctacgatccgaaatccggagaa
gtgctgatcgacggcgttaacctcaaggagttccagctgaaatggatcagaagcaagatc
ggtttggtcagccaagaaccggttctgttttcgtcgagcatcatggagaacatcgcgtac
gggaaagagaacgcgacggtggaagagatcaaagcggccgcggagctggccaacgcggcc
aagtttgtagataagttgcctcaggggttggatacgatggtcggagagcacgggacgcag
ctctcgggaggacagaaacagaggatagctatcgcgagagccattctcaaagatccgagg
atcctcctcctcgacgaagctacgagcgcgcttgatgctgaatccgagagagtggttcaa
gaggctttggatcgagtgatggttaaccggactacggttatcgtcgcgcatcggttaagc
acggttcgaaacgcggatatgatcgcggttatccaccgcgggaaaatggtggagagaggt
tcgcactccgagctgttgagagatcccgagggagcttactcgcagctcattcgtttgcaa
gagattaacaaaggacaaacatcgtcggagattgcgtccggttcgtctttcagggcttcg
aatcttaaaaaatcaatggaaggatcttcggttctcagcggcgggacttcctccgttggg
aatagtagccgtcatcattcgctgaacgttctaggtttagctgctggattagactttggt
ggcggtagcgtgagccagagggtaggtcaagaggaatcggttcaagaaccggttcagaaa
gtatcgttaaccaggatcgcggctttaaacaaaaccgagatcccggttctacttctaggg
accgttgcggcagctatcaacggtgcgattttcccgcttttcgggattctgatttcacga
gtcatcgaagcgtttttcaaaccggctgacgaattaaagaaagattcgaggttctgggcg
attatattcgtagctctcggagtcacttctctgatcgtctcaccggttcagacctatttg
ttctcggtggcgggagggaaactgattcgacggatcagatcgatgtgtttcgagaaagcg
gttcacatggaggtcgggtggttcgacgagccgcagaactcgagcggtacgatgggtgcg
aggctttccgctgacgcagctttgatcagggctttggtcggggacgcgttgtctctagcg
gttcagaacgctgcttctgctgcgtctggattaatcatagcgttcaccgcgagctgggag
ctggcgtttataatcttggtgatgcttcctcttattggtatcaatggttatattcaagtc
aagtttatgaaaggattcactgccgacgcaaagacaaagtacgaggatgctagtcaggtg
gctaatgatgcggtggggagtataagaacagtggcgtctttctgcgcagaggagaaagtg
atgcagatgtataagaagcaatgcgaaggaccgataaaagatgggataaaacaaggtttc
atcagtggattagggtttggagtctccttcttcattctgtttagtgtctacgccacaagc
ttctacgcgggtgctagattggttgaagctggcaggactactttcaataatgttttccag
gtgttctttgcgttaacaatggcagctattgggatctctcagtcgagtactttcgctcct
gattctagcaaggctagggttgcagctgcgtctatttttggaatcatcgatagaaaatca
aagatagattcgagtgatgagtcagggacggtactggagaacgttaagggagatattgag
cttcggcacataagctttacttatccagcaagaccagacattcagatctttcgtgatctt
tgcttatccattcgtgcaggaaagaccgttgctttggtgggagagagtgggtcagggaaa
tcaacggtgatctcgctgttacaaagattctacgatcctgattcaggtaacataactcta
gacggagttgagctcaagagtctgcaactgaaatggttgagacaacaaatgggactggtg
ggacaagagcctgtcttgttcaacgacaccatccgagccaacattgcatatggcaaagga
agcgaagaggcggcgaccgagtctgagatcatagcagctgctgaactcgccaacgcacac
aaattcatctctagcatacaacagggttacgacacggtggtaggagaaagggggatacag
ctatcaggaggacaaaaacagcgtgtggctatagcacgcgccatcgtgaaagagccgaag
atactgcttttggacgaagcaacgagcgctcttgatgcggaatcagagcgagtggttcaa
gacgcgcttgaccgagtgatggtgaaccggaccacggtggtggtggctcaccggttatcg
actattaaaaacgcggacgtgatcgctgtggtgaagaacggtgtgatcgctgagaaagga
actcacgagaagttgatcagaatcgagggtggagtttatgcttcacttgttcagcttcac
atgactgcttctaactga
DBGET
integrated database retrieval system
