Raphanus sativus (radish): 108828018
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Entry
108828018 CDS
T06014
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 6 isoform X2
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108828018
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rsz01009
]
108828018
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsz03021
]
108828018
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108828018
03041 Spliceosome [BR:
rsz03041
]
108828018
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108828018
Protein phosphatases and associated proteins [BR:
rsz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
108828018
Transcription machinery [BR:
rsz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108828018
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108828018
Spliceosome [BR:
rsz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108828018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
108828018
NCBI-ProteinID:
XP_018457063
UniProt:
A0A6J0LB22
LinkDB
All DBs
Position
9:19892192..19893868
Genome browser
AA seq
322 aa
AA seq
DB search
MEESLVDDIIKRLLETNNGRTVKQAKLLDVEIRQLCSASKDVFLSQPNLLELEAPIKICG
DVHGQFPDLLRLFEYGGYPPAANYLFLGDYVDRGKQSIETICLLLAYKLKYKLNFFLLRG
NHECASINRVYGFYDECKRRYNVRLWKSFTDCFNCLPVAALIDDKILCMHGGLSPDLKSL
DDIRRIPRPVDVPDQGVLCDLLWADPDKEIQGWGENDRGVSYTFGPDKVAEFLQTHDLDL
VCRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKSTEKKG
KFGYNNNVHRPGTPPHKGGKGG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagtttagtggacgatataataaagcggctgttggagactaataacgggagg
acggtgaagcaggcgaagctacttgatgtggagatacgccagctctgctctgcttccaaa
gacgtttttctcagccagcctaatctcctcgagcttgaggctcctatcaagatttgcggt
gatgttcatggtcagtttccagacctcttgcgattgtttgagtatggtggctatcctcca
gctgcgaattacttgttcctcggggactatgttgatcgtggtaagcagagcatagaaacc
atatgccttcttcttgcctacaagctcaaatacaagctcaacttctttcttctcagaggc
aatcacgaatgcgcttcaatcaaccgtgtttacggattctacgatgagtgcaagagaaga
tataatgtgcgcctgtggaagagtttcaccgactgtttcaactgtctgcctgttgctgct
ctcattgacgacaagattctctgtatgcacggtggactatcgcctgatctgaagagcttg
gatgatatcaggcggattcctcgtcctgttgatgttcctgatcagggcgtcctttgtgat
ttgttatgggctgatcctgacaaagaaatccaaggctggggggagaatgacagaggtgtg
tcttatacatttggtcctgacaaagtggctgagttccttcagactcatgaccttgatctt
gtgtgccgagctcatcaggttgtagaagatggatatgaattctttgcaaagagacaactg
gtgacaatattctctgcacctaactactgtggtgagtttgacaatgctggcgcaatgatg
agtgttgatgatagtttgacatgttcattccaaatcctcaagtcaactgagaagaaagga
aaatttggatacaacaacaacgttcataggccaggaacaccacctcataagggaggaaaa
ggtggttga
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