Raphanus sativus (radish): 108833146
Help
Entry
108833146 CDS
T06014
Name
(RefSeq) ABC transporter B family member 22-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108833146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108833146
04147 Exosome [BR:
rsz04147
]
108833146
04090 CD molecules [BR:
rsz04090
]
108833146
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108833146
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108833146
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108833146
CD molecules [BR:
rsz04090
]
Proteins
108833146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_21
ABC_ATPase
AAA_23
RsgA_GTPase
AAA_16
AAA_15
Zeta_toxin
AAA_30
AAA_28
DLIC
Motif
Other DBs
NCBI-GeneID:
108833146
NCBI-ProteinID:
XP_018462084
UniProt:
A0A6J0LQK4
LinkDB
All DBs
Position
9:32058841..32065185
Genome browser
AA seq
1230 aa
AA seq
DB search
MKSWGSLRSIFMHADGVDWMLMGLGLIGAVGDGFITPIIFFITGLLLNDLGGSFSDGNFM
KAISKNVVALLYVAGASWVICFLEGYCWTRTGERQAARMRERYLKAVLRQDVSYFDLHVT
STSDVITSVSSDSLVIQDVLSEKFPNFMMNASAFVASYIVAFIMLWRLTIVGFPFVVLLL
IPGLMYGRALISISMKIREEYNEAGSIAEQAISLVRAVYAFGSEKKLIAKFSVALQGSVK
LGLRQGLVKGISLGSNGIVYAIWAFMAWYGSRMVMYHGAKGGTIFAVIICLTFGGTSLGR
GLSNLKYFSEAVVAGERIMEVIQRVPDIDSDNLEGQTLEKIKGEVEFKHVKFMYPSRPEA
PIFDDFCLRVPSGKTVALVGGSGSGKSTLLSLLQRFYDPVAGEILLDGVSINKLQVNWLR
LQMGLVSQEPALFATSIEENILFGKEDASMDEVVEAAKASNAHNFISQFPHGYKTQVGER
GVQMSGGQKQRIAIARAIIKSPTILLLDEATSALDSESERVVQEALDNASVGRTTIVIAH
RLSTIRDADVICVVQDGRIVESGSHEELMENLDGQYTSLVRLQQMDNQVPDANVSVKVQG
GQLLTKDLNYGPKLSNESRSNTLTSSSTESKHPGSVPKSKKPPVPSFKRLMAMNRPEWKH
ALYGCLSAALYGGVQPISAFVSGSMVSVYFLTSHDEMREKTRIFVLFFVGLAVFTFLFNI
IQHYSFAYMGEYLTKRIREKMLTKILTFEVNWFDEEENSSGAICSRLAKEANLVRSLVGE
RVSLLVQTISAVAIACTLSLVIAWRLAIVMIAVQPLVVVCFYAQRILLKSLSKKAIKAQD
ESSKLAAEAVSNIRTITSFSSQERILKLLKRVQEGTRRESVHQSWLAGTVLGTSRSLITC
TSVLNFWYGGKLIDAGKMMAKAFFEIFSILVSTGRVIADAGSMTTDLVKGSDAVGSVFAV
LDRSTTIDPESPNGYVTEKIKGQISFVNVDFAYLTRPNVVIFKNLSIEIDQGKSTAIVGP
SGSGKSTIISLIERFYDPLKGCVKIDDRDIKSYHLRSLRQHIALVSQEPALFAGTIRENI
MCGGGASENIDESEIIEAAKAANAHDFITSLTNGYDTNCGDRGVLLSGGQKQRIAIARAV
LKNPSVLLLDEATSALDSQSERVVQDSLERVMVGRTSVVIAHRLSTIQNCDVIAVLDKGK
VVECGNHSTLLAKGPTGAYFSLVSLQRNIS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttggggaagcttacgatcgatatttatgcacgcagacggtgtggattggatg
ctgatgggactaggactaatcggagccgtcggtgatggcttcatcactcctattatattt
ttcatcaccggcttactactgaatgacctcggtggttcgttcagtgatggaaacttcatg
aaagccatctccaagaatgttgtagctttgctttatgtggctggtgcatcttgggtaata
tgttttcttgaaggatattgttggacaagaacaggggagagacaagcagcaagaatgaga
gagagatacttaaaagcagtgttaagacaagatgtaagttactttgatcttcatgtcaca
agcacttctgatgtcatcacaagcgtttctagtgacagccttgtcatccaagacgtcctc
agtgaaaagtttccaaactttatgatgaatgcatctgcgtttgtggcaagctacatagtg
gctttcatcatgctatggagactcacaatcgtaggtttcccgttcgtcgttctcctcttg
attcctggactaatgtatggacgagccctcatcagcatctcgatgaaaatacgtgaagag
tacaatgaagctggttctatcgccgaacaagccatctcgttggtgcgggccgtctatgca
tttggtagtgagaagaagttgatagctaaattctcagttgcgcttcaaggatcggtgaag
ctagggctgagacaagggctagttaaaggaatctcccttgggagcaatggtatcgtttac
gccatttgggcgttcatggcatggtatggaagtcgaatggttatgtaccatggtgccaaa
ggtggtaccatctttgcagtcatcatttgccttaccttcggtggcacatcacttggtcga
ggtttgtcgaatctcaaatacttttcagaggctgttgtagcaggggaaaggatcatggaa
gtgatacaaagagttccagatattgactcagacaaccttgaaggtcaaactctagagaaa
atcaaaggagaagttgaatttaaacatgtgaagttcatgtacccctctagaccagaagct
ccaatctttgatgacttctgtttaagagttccatcaggaaaaactgtggctctagttggt
ggaagcgggtcgggaaaatcaacgctgttgtcacttctccagaggttttatgatccagtc
gctggagagattttacttgatggtgtgtccattaacaagttgcaagtgaattggttgaga
ttgcagatgggtttagtcagccaagagccggctctcttcgccacatcaatagaggagaac
atcttatttggtaaagaggatgcatccatggatgaggtggtggaagctgcaaaggcctca
aatgctcataacttcatctcccagttccctcatggatacaaaactcaggttggggagaga
ggagtgcaaatgtcagggggacagaagcagaggatagcaattgcacgtgccataatcaaa
tcaccaacaatcctcttactagacgaggcaacaagtgcattggactcagaatctgaaagg
gtagttcaagaagccttggacaatgcatctgttggccgtacaactattgttattgcccat
cgcctctctactattcgtgatgctgatgttatctgtgtagtccaagatggtcgcattgta
gaatctggttcacacgaagagctcatggagaacttagatggtcaatatacttctctagtc
cgcttgcaacaaatggataatcaagtaccagatgctaacgttagtgtaaaagtgcaaggt
ggtcagttattgaccaaagatttgaactacggtccaaaactgtctaatgaaagcaggtct
aacactttaacgagttcaagcactgagtcgaagcatcctggttcagttcctaagagtaag
aagccacctgtgccatcttttaagagactgatggcaatgaatagaccagagtggaaacat
gccttatatggttgcttaagtgcagctctatatgggggagtacaaccaataagtgcattt
gtttcaggatctatggtgtcagtgtatttcttaacgagtcatgacgagatgagggagaag
acaaggatctttgtcttgttctttgttggtcttgctgtctttactttcttgttcaacatc
attcaacattatagtttcgcttacatgggagagtacctaacgaaacgtatcagagagaag
atgcttacgaagatactgacctttgaagtcaattggtttgatgaagaagagaactcaagt
ggtgcaatttgctcaagacttgcaaaagaagctaacttggtgaggtcactggttggtgaa
cgagtgtcattgttggtacaaaccatatcagcagtggccatagcttgcacactatctctg
gtcatcgcttggcgactagccattgtcatgatcgccgtgcagcccttagttgtagtatgc
ttctacgcgcaacgcatcttactcaaaagcctatccaagaaagcaatcaaagcgcaagac
gagagtagcaagctagcagcagaagcagtctccaacatccgaaccatcacatctttctca
tcacaagaacggatcttgaaactactcaaaagagttcaagaaggtacaagaagagaaagc
gtacaccaatcatggctagctgggaccgtcctcggaacttctcgaagcctcataacatgc
acttcggtgctaaacttctggtacggtggtaaactcatcgatgcgggcaagatgatggca
aaagcattctttgagattttctcgatacttgtgagtacgggacgtgttatagcagacgct
gggagcatgacgaccgatctagttaaaggctctgatgcggtcgggtctgtgttcgctgtg
ttggaccgttccacgaccattgaccccgagagtcctaacgggtacgtaacggagaaaata
aagggacagataagttttgtcaacgtggactttgcttacctcacaagaccaaacgtggtt
atattcaagaacttgtctattgagatagaccaaggaaagtcaacagctatcgtcggtcca
agcggttcaggaaagtcaacgatcattagcttgatcgaacggttctacgaccctttaaag
ggttgtgttaaaatcgacgatcgtgatataaagtcgtatcatttaagatcgttacgtcaa
cacatagctttggttagtcaagagccagcgttattcgctgggaccatcagagagaacata
atgtgcggaggaggagcgtcggaaaatatcgacgagtcggagattatagaggcggctaag
gcagctaatgctcatgattttattacatcgttaacgaacggttatgacacgaactgtggg
gacagaggtgtgctgttgtcgggtgggcagaaacagaggattgctatagctcgtgcggtt
ctgaagaacccgtcggtgttgctgctggatgaagcgacgagcgctttggatagtcagtcg
gagcgcgtggtgcaagactcgctggagcgagtgatggttgggaggactagtgtggtgatc
gctcataggcttagcacgatacagaactgtgacgttatcgcggttttggataaaggaaaa
gtagtggagtgtgggaaccactcgacgttgttggcgaagggtcccacgggtgcttatttc
tcattggtcagtctccaaagaaatatctcttaa
DBGET
integrated database retrieval system
