Raphanus sativus (radish): 108839420
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Entry
108839420 CDS
T06014
Name
(RefSeq) ABC transporter B family member 13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108839420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108839420
04147 Exosome [BR:
rsz04147
]
108839420
04090 CD molecules [BR:
rsz04090
]
108839420
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108839420
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108839420
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108839420
CD molecules [BR:
rsz04090
]
Proteins
108839420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
ABC_ATPase
AAA_30
AAA_21
Zeta_toxin
RsgA_GTPase
AAA_24
AAA_23
nSTAND1
P-loop_TraG
DEAD
Mg_chelatase
APS_kinase
DUF3987
DUF87
Motif
Other DBs
NCBI-GeneID:
108839420
NCBI-ProteinID:
XP_018467688
UniProt:
A0A6J0M6U9
LinkDB
All DBs
Position
1:complement(11876849..11881694)
Genome browser
AA seq
1239 aa
AA seq
DB search
MDSTEPLSNGNIQNETDSKKKDSVSLMGLFGAADKLDCFLMILGSLGACTLGATLPLFFV
FFGKMLDSLGNLSTDPKALSSRVSQNALDLVYLGLVTFVSAWIGVACWTQTGERQTARLR
INYLKAILAKDITFFDTEARDSNLIFHISSDAILVQDAIGDKTGHVLRYLSQFIAGFVVG
FLSVWQLTLLTLAVVPLIAIAGGGYAIIMSTISEKSEAAYADAGKVAEEVISQVRTVYAF
VGEEKAVNTYSNSLKKALKLCKRSGLAKGLGVGLTYSLLFCAWALLLWYASLLVRHGKTN
GAKAFTTILNVIFSGFALGQAAPSISAISKGRVAAANIFRMIENKNLEGSERLDEGTALQ
NVAGKIEFHQVSFAYPSRPNMVFENLSFTIPSGKTFAFVGPSGSGKSTIISMVQRFYEPK
SGEILLDGNDIKSLKLNWLREQMGLVSQEPALFATTIASNILLGKENASMDQIIEAAKAA
NADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESEK
IVQQALDNVMEKRTTLVVAHRLSTIRNVDKIVVLRNGQVVETGSHTELLSRGGDYATLVN
VQETEPQEDPRSIMSEAGKSHAGSCSSRRVSSSRRTSSFREVQEKSDKDSDGEDLSSSST
IWELIKLNAPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLTAFYSPSPSVIKRDVEKVAI
IFVGIAVVTAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNTGSLTSI
LAADATLVRSALADRLSTIVQNLSLTVTALAIAFYYSWRVAAVVTACFPLLIAAALTEQL
FLKGFGGDYTRAYSKATSVAREAIENIRTVASFGAEKQISEQFACELSKPTKSAFLRGHI
SGIGYGFSQFLAFCSYALGLWYVSVLIKHKETNFSDSIKSFMVLIVTAFSVAETLALTPD
IVKGTQALGSVFRVLHRETEIPPDQPNSRLVTQIKGDIEFRNVSFAYPARLDVPIFQNLN
LRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDADKGNLCIDGKDIKALNLRSLRKKLALVQ
QEPALFSTTVLENIKYGNENASEAEIIEAAKAANAHEFISRMEEGYKTHVGEKGVQLSGG
QKQRVAIARAVLKDPSVLLLDEATSALDTSSERLVQEALDKLMKGRTTVLVAHRLSTIRK
ADTIAVLHKGRVVEKGSHRELVSISNGFYKQLTSLQELV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggatagcacggaacctctctctaatggaaacattcagaatgagacggactcaaagaag
aaagactctgtttcattgatgggtttgttcggcgcagcagataaacttgattgctttctg
atgattctaggcagtttaggtgcgtgtactcttggcgctacgcttcctctcttctttgtg
ttcttcggaaagatgctagactctcttggcaatctatctacagatcctaaagccctatct
tcccgcgtttcacagaatgctctagacttggtctacttaggactggttacttttgtatca
gcctggatcggagttgcatgttggacgcaaacaggggaaagacaaacagctagattgcgt
ataaactatctcaaagcaatcttagcgaaagacattactttctttgatacagaagctaga
gattcaaatctcattttccacatctcaagtgatgctatcttggtccaagatgcaattggt
gataagacaggccatgtattgcggtatctatctcagttcatagccggatttgtggtaggt
tttctgtcggtatggcaactaacgctgctcacgttagcagtggttccattgatagcaatt
gcaggaggagggtacgctataatcatgtctacaatctcagagaagagtgaagctgcttat
gctgatgcaggcaaagtcgcagaagaggtaatttcacaggtgagaacagtgtatgcattt
gtaggagaagagaaagctgtaaacacttactcaaactctctcaagaaagctctgaaactc
tgtaaaagaagcggtcttgctaaaggcttaggagttggattaacatacagcctcttgttt
tgtgcttgggctttgcttttgtggtacgctagtcttcttgttcgccacggcaaaacaaac
ggcgcaaaagccttcacaacgatcctcaacgtcatctttagcggattcgccttaggtcaa
gcggcgcctagcatatcagctatctccaaaggcagagttgctgctgcaaatatattcaga
atgatagagaacaagaatctcgaaggttctgaaagactagacgagggaacagctttgcaa
aacgtagctgggaagattgagtttcatcaagtgtcttttgcttatccttcaagaccaaac
atggtgtttgagaatcttagtttcactataccttcaggcaagacttttgcatttgtgggt
ccaagcggctcagggaaaagcacaatcatatcaatggttcaacgtttctatgaaccaaag
tcaggggagattctcttggatgggaatgacatcaagagcttgaagctgaactggttgaga
gaacagatgggtttagtgagccaagaaccggctctattcgccaccacaatagcttccaat
attcttcttggtaaagagaatgctagtatggatcagatcattgaagctgctaaagcagcc
aatgcagattctttcattaaatcattacctaatggttataatactcaggttggagaagga
ggaactcagctctcaggaggacagaaacagaggattgctattgctcgagcggttctaagg
aatccaaagatactactcttagatgaagcaacgagcgctcttgatgctgaatcagagaag
attgtgcagcaagcacttgacaatgttatggaaaaaagaacaacactagtggttgcacat
agattatccaccatccgtaatgttgacaagattgttgtattgagaaatggtcaagttgtg
gaaaccggtagccacacagaactgctttcaagaggaggagattacgcgactcttgtcaat
gtccaagagacagaacctcaagaagaccctagatcaattatgtctgaagccggtaagtct
cacgctggttcttgtagttcaagaagagtttctagctcaagaaggacctcaagcttcagg
gaagtccaggagaagagtgataaagactctgatggagaagatttgagctcatcttcgacg
atatgggaactgataaagctgaatgctccagagtggccatatgcgttacttggctcaata
ggtgcagttcttgcaggagcacaaactccattgttctccatggggattgcttatgtgtta
acagcgttttattctccttctcctagtgtgatcaagcgtgatgtcgaaaaggtagctatt
atctttgttggtattgcagttgtaacagctcctatatatctccttcagcattacttctat
acacttatgggagagcgtcttacttccagggttcgcttatccctcttctcagcgattctt
tcaaatgagattgggtggtttgatttagatgagaacaacactggctcactcacttcaatc
ttggctgctgatgcaactttggtgagaagtgctctagcagatcgcctctcgacaatagtc
caaaacctgtctcttacagtcacagcgttagctatagccttttactacagctggcgtgtt
gctgctgtagtaactgcttgtttccctcttctcattgccgctgcacttaccgagcaactg
tttctaaaaggctttgggggagattacacaagggcttactctaaagcaacttcagtggcg
cgtgaagcgattgagaatataagaactgtggcttcgtttggtgctgagaagcagatctcc
gagcagtttgcttgtgagctaagcaaacccaccaagagtgcttttctcagaggccatatc
tctggaattggatatggcttttcccagtttcttgcgttctgttcctacgctcttggtctc
tggtacgtctcggttttgatcaagcacaaggagacgaatttttcggatagtatcaagtct
ttcatggtgttgatcgtcactgctttctcagttgcggaaacgcttgccttgacgccagat
atcgtgaagggcacgcaagcgctcggatcggtttttagggttttacatagagagaccgag
atacctccagatcagcctaactcaagactggtcactcagatcaaaggggatatagaattt
agaaacgtgagctttgcgtaccccgcaagacttgatgtccccattttccaaaacctaaac
ctaagagtctcagccgggaaaagtcttgcggtcgtgggacctagcggttcggggaagagc
acggtgatcggtctgatcatgagattctatgacgcggacaagggcaatctctgtatcgat
gggaaagacataaaagccctaaacctacgtagcttgcggaagaagctagcgttggtccag
caagaaccggctctgttttcaacgaccgttctcgagaacatcaagtacgggaacgagaac
gcgtcggaggcagagataatcgaagcagctaaagctgcgaacgcgcacgagttcataagc
aggatggaagaagggtacaagacgcacgtgggtgaaaagggagtgcagttgtcaggtggt
cagaaacagagagtggctatcgcgagggcggttctaaaggatccttcggtgcttctcctt
gatgaggcaacgagtgctttggacacgagctcggagagacttgtccaagaggcgctagac
aagcttatgaagggacgaactacggtgctggtggcacataggctctcgaccataagaaaa
gcagacaccatcgctgttttgcataaaggaagagttgtggagaaaggaagtcatagagag
cttgtttccatatctaatggtttctataagcaattgacaagtcttcaagaactggtatga
DBGET
integrated database retrieval system
