Raphanus sativus (radish): 108841867
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Entry
108841867 CDS
T06014
Name
(RefSeq) probable pectinesterase 53
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00040
Pentose and glucuronate interconversions
rsz01100
Metabolic pathways
Module
rsz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108841867
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
108841867
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Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
108841867
NCBI-ProteinID:
XP_018470146
UniProt:
A0A6J0MF50
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Position
2:19104853..19108309
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AA seq
382 aa
AA seq
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MPKFNSSQAPILFLLLLVIFLCSTQTNCHSKGIRLRPRNQKNVNTTSQSQNPEEEFMKWV
RFVGSLKHSVFKAAKNKLFPSYTLTVHKNHNKGDFTTIQDAIDSLPLINLVRVVIKVHAG
VYQEKVNIPPMKSFITIEGEGAETTIVEWGDTAQTPDSRGNPMGTFNSASFAVNSPFFVA
KNITFKNTTPVPLPGAVGKQAVALRVSADNAAFFGCKMLGAQDTLYDHSGRHYYKDCYIE
GSVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLEDTGFSFVNCKVTGTGVLYLGR
AWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGEGANYAGRVAWAKEL
TDEEAKPFISLTFIDGSEWIKL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagttcaattcatcccaagctcccattttgtttctccttcttctcgttatcttt
ctttgttcaacgcaaacaaattgtcactctaaaggtatacgattacgaccaagaaaccag
aagaatgtgaacacgacgagtcagtcacaaaacccggaagaggaattcatgaaatgggtc
agattcgttgggagccttaaacactcagtgttcaaggcagccaagaacaaactcttccct
tcatatacactcactgtccataagaatcacaataaaggtgacttcactacaatccaagac
gccattgattctctccctctcatcaacctcgttcgtgtcgtcatcaaagttcatgctgga
gtttaccaggagaaggttaacatacccccaatgaagtcattcataacaatagaaggagaa
ggagcagagacaacaatagtggaatggggagacacagcacaaacacctgactcaagaggc
aatcccatgggcacctttaactctgcttctttcgccgtgaactcacctttctttgtcgct
aagaacatcactttcaagaacacgaccccagttcccttgccgggcgcggttgggaaacaa
gccgtggcattgagggtgtcagcggacaatgctgcatttttcgggtgtaaaatgcttggt
gctcaagacactctctatgatcattcaggaaggcattattacaaagattgttacattgag
ggatcggttgacttcatctttggcaatgccctttctctctatgagggatgtcacgtgcat
gcgatagcggataagctaggagcagtaacggcgcaagggaggagcagtgtgctagaggac
acaggattctcgtttgtgaactgtaaggtgacagggacaggagtattgtatcttgggagg
gcatggggtcccttctcaagagtcgtctttgcttacacgtatatggataacatcatcctc
cctagaggctggtataattggggcgatccttcacgcgagatgacggtgttttatggtcag
tacaagtgcactggagaaggagcaaactatgcaggaagggtagcttgggcaaaagagctc
accgacgaagaagctaagccttttatttctcttacctttatcgacggctctgaatggatc
aaactctaa
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