Raphanus sativus (radish): 108847206
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Entry
108847206 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108847206
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108847206
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108847206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Motif
Other DBs
NCBI-GeneID:
108847206
NCBI-ProteinID:
XP_056862524
UniProt:
A0A9W3DFB6
LinkDB
All DBs
Position
3:8092608..8109025
Genome browser
AA seq
2453 aa
AA seq
DB search
MDKETEILSRLAANHLHLAQFEPLKATLLALRVRNPDLAHSILQTIVSNAGRFENVLWSP
RSCSSPSLLAFLSTIELLRFENSTSPWGFDSETLGLRADFLLMVQVLIDRVRDGGEKEGN
RVRVLQGFLDLGVERLRFDVDASSSFMIEEDDVMALRSIVLDYSDVFDALCCNIKRQLNG
SNSCMVEEVMERNEAIDIDPRGEDNNDVFALIHRNVQLAQLDAMRRKLDEGDELGAADRI
RYLHLDYGVEKEDYHSVLKDLLSRVMEKKDEYGDSWHMVRRNLLFIYKEALSSNCGDLLQ
MIQGIQDGLLLPDNHLHISLDNDQIPPPLECFLRCLVDLKTERNVEDKNSPLSMAVNSCL
RDMYHYARISGSHVLECVMCAALSYVKKEMLQEANDVLTLFPRLRPLVASMGWDMLPGKT
AARRKLMRLLWSSNSQAIRLEESTLYGNNTDEKSCVEHLCDTLCYRLDLASFAAYISSGK
SCTPKASFLMHGNVSSENNDAEVDPFVENLVLERLSAQSPLRVLFDVVPGIKFKEAISLI
SMQPIASTAEAWKRIQDIELMHMRYALEAIVLALGAMDEVIKDETDTSHHVVFYYLKDLT
THLEAIKNVPRKIMMVNIVISLLHIDDIRLSSTSSLDLGDLTTEGENEIVISFTRKLLNV
LRRNLPSELIEQECQLDGSYSADGRQALEWRVSMAKHFIEDCEWRLSIMQHLLPLSERQW
GLKDVLSVLRAAPAKLLNLCMQRAKYDIGEQAVHRFALSAEDKATLELAEWVDNAFNRTL
VEDVMSRTAEGASAVQDLDFGSLASQLSPLAVILLCIDAAASSAKSTKISKQLLDKSQVM
LSEIYPGGSPKVGFTYWDQVHEVAIISVLRRILKRLQEFLEQDNPQTLQASFSGDTIISS
ATESHRQGQKDRALAMLHQMIEDAHKGKRQFLSGKLHNLARAIADEKPEVDILKGDVRDM
TFDKDGVLGLGLKHKKQSPSGSASRDVDENHVSHESEEKGKRSFGPFSNKTSTYLSQFIL
YIAAIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLVFDRSSTDAAAKVAEVMSADFVHEV
ISACVPPVYPPRSGHGWACIPVIPTTTYSHSESKVMSPSKEAKPNCYVRSSATPGVPLYP
LQLDVIRRLVKISPVRAVLACVFGGSILYNGSDSVISSSLNDEFTSSPDADRLFYEFSLD
QSERFPTLNRWIQMQTNLHRVSEFVVTPKQKPDDARIKTDERTAIKRLREHDSDSESDAE
EAFSNNIRPALTHYSARDGGSFETGASRTDPTVFLSFDWENEGPYETAVNRLIDEGKLMD
ALALSDRFLRNGASDWLLELLIKSSEETPSTLGRSQGYGSQRIWSNSWQYCLRLKDKQLA
VTLALKYMDTWELDAALNVLTMCSCHLLESDPVSYEVLHRRKALQKYSHILSADDRHNSW
QEVEAECKEDPEGLALRLAGKGAVSAALEVAESAELSIDLRRELQGRQLVKLLTTDPLNG
GGPAEASRFLSSLQDSADALPVVMGAMQLLPDLRSKQLLVHFFLKRRDSNLSDLEVSRLN
SWALGLKVLAALPLPWQQRCSSLHEHPHLILEALLMRKQLQYASLILREFPALRDNNVIM
AYAAKAIAVIVSPPPREPRITVSASRLRQKQRAGPAKPSFTSSLSNFQREARRAFSWGPR
NAENRTTSKDVRKRKSSGLGAPERAAWEAMTGIQEDQGSSFSADGQDRLPSVSIAEEWML
TGETTKDEAVRASHKYESTPDIVLFKALLSLCSDELVSARTAIELCINQMKNVLNSKKLS
EAASVETIGRAYHATEAFVQGLTYAKSLLRKLLGASEFTNNNGDRNRDLDDISSDTGSSS
VGSQSTDEPSEVLSLAEIWLGRAELLQSLLGSGISASLDDIADKLSSESLRDRLVSDERY
SMAVYMCKKCKIDVFPVWKAWGLALLRMERYAQARVKFKQAFQLKGEDIPDVIQEIINTI
EGGPPVDVSTVRSMYDHLAKSAPTILDDSLSADSYLNVLHMPSTFPRSERSRRSLESEKN
NSLPGSDFEDGPRSNLDSTRYSECTNYLQEHSRQNLLGFMFRHGHFKDACILFFPPSALP
PPLQSLSLGAVSSSSSPQRTDPLATEYGTIETLCEFCVGYGAISSLEEVITERLDSAKHQ
DQAINQYIAGALSRICAFLETNRHFNYLYKFLVLKKDYVTSGYCCIQLFMNSTTQEEAVR
HLEHAKAHFEEALTARHRGSDSKKLVIKGVRGKGVNEKLSEEALVTLSSRVKMQIDVVKS
FSDSEGAPWKLSLFGNPNDSETSRRRCEIVETLVEKNFDLAFQVIYEFKLSAVDIYAGVA
ASLADRKKGSQLTELFKNIKGTIQDDDWDQVLGAAINVYANKHKERPDRLIDMLTSSHRK
VLACVVCGRLKRAFQIASKSGNVADVQYVAHQASHANSHTVLGMCKQWLSQNM
NT seq
7362 nt
NT seq
+upstream
nt +downstream
nt
atggataaggaaacggagattctctcccgtctcgccgcgaaccaccttcaccttgctcaa
ttcgagccgttaaaggcaacgttactcgctctcagggttcgaaaccctgacctcgcacac
tcgattctccagaccatcgtctccaacgccggtagattcgagaatgtcctctggtcacca
cgctcttgctcttccccgtctcttctcgccttcctctccaccatcgagcttctcagattc
gaaaactctacttccccttgggggttcgactcagagactctcggtttgcgtgcggatttc
ttgttgatggtccaggttttgatcgatagagttagggatggtggtgagaaggaaggaaac
cgtgtacgggttttgcaaggttttttggatttgggtgttgagaggttgaggtttgatgtt
gatgcaagtagcagctttatgattgaagaagatgatgttatggctttgaggagtatagta
ttggattactctgatgttttcgatgccttgtgctgtaacattaagaggcaacttaatggt
tccaacagctgtatggtggaggaagtaatggagagaaacgaggcgatagatattgatcct
cgaggagaggataacaatgatgtgtttgctttgatacacagaaatgttcagttagcacag
ttggatgctatgagaagaaaactggatgaaggagatgagctcggggcagctgatcgaata
cgctatcttcaccttgattatggcgtggagaaagaggattatcattccgttctaaaagat
cttctttcaagagttatggaaaaaaaggatgaatatggtgactcctggcacatggtgcgc
cggaacttgctgtttatctataaggaagctctctcttctaattgcggagatcttcttcag
atgattcagggtatccaagatggtttgcttctaccagataaccatctacatatatctctc
gacaatgaccaaattcctccccctctagagtgtttcctgagatgccttgtagacctgaaa
actgagagaaatgtagaggacaaaaactccccgctgagcatggcagttaattcttgcctc
agagacatgtatcattatgctcgtatttctggatcacatgtgcttgagtgtgtgatgtgt
gctgctttgtcttacgtgaagaaagaaatgcttcaggaggctaatgatgttcttactttg
tttcccagacttcgcccattagtagcttccatgggttgggacatgttgcctggaaaaact
gcagcccgtagaaagctgatgcggctactttggtctagtaactcacaagcaattcggtta
gaagaatctactctttatggaaacaatacagatgaaaaatcttgtgtggaacatctctgc
gatacattatgttatcggctggaccttgcatctttcgctgcttatatcagttctggtaaa
tcttgtaccccaaaggcatctttcttgatgcatggtaatgtgtcatctgagaataatgat
gcggaggtggatccttttgttgaaaatcttgtgttggaaaggctttctgcgcagagtcca
cttcgggtgttgtttgatgttgttccgggtataaaattcaaagaagctatatcactgatt
agtatgcaacctattgcttcaactgcagaagcctggaagaggattcaagatattgaattg
atgcatatgcgttatgctttggaggctattgttttagcattaggtgcgatggacgaggtc
attaaagatgagacggatactagtcatcatgtggtattttactatttaaaagacctcacc
acccatttggaggccattaaaaatgttccacgcaagattatgatggtcaacatagttatt
tcactcttacatattgatgatattcgtctcagttctacttctagtttggatcttggcgat
cttactacagaaggggaaaatgaaattgttatatctttcacaagaaagctactcaatgtt
ttacgccgcaatcttccatcagagctgattgaacaagagtgtcaactggatggtagttac
agtgctgatggaagacaggctttagaatggagagtatcgatggctaaacatttcattgaa
gattgtgaatggcggttatctattatgcagcatcttttgccactttctgaacgccagtgg
ggtttaaaggatgttttaagtgttctaagggcggcccctgcaaaactacttaacctctgc
atgcaaagagctaagtatgacattggagagcaggcagttcatcgttttgccctatcagca
gaggacaaagctactcttgaattagctgaatgggtggataatgccttcaacagaacattg
gtagaagatgtgatgtctcgtactgctgagggagcatctgcggttcaagatttagatttt
ggttctctagcttctcaattgagtccattggctgtgattttactatgcatagatgcggct
gcttcttctgccaaatctacaaaaatttccaaacagttattggataagtcgcaagttatg
ttatccgaaatatatcctggaggatctccaaaggtggggtttacttactgggatcaggtc
cacgaagttgcaataatctctgtattgcgaaggatcttaaagcgtctacaggaattcctg
gaacaggataaccctcaaactcttcaagccagttttagtggagataccatcatttcttca
gccacggaatctcatcgacagggtcaaaaagatcgcgctcttgcaatgctacatcaaatg
attgaggatgctcataagggcaagcgacagttcctgagtggaaagcttcacaacctagcg
agagcaatcgctgatgaaaaaccagaagttgacatactcaaaggggacgtaagagacatg
acttttgacaaggatggagttcttggtcttggtctaaaacataagaagcaaagtccttct
ggttcagcaagtagagatgtggatgaaaatcatgtatcacatgaaagcgaagagaaggga
aagaggtcatttggcccatttagcaacaaaacctctacttatctatctcagtttatactc
tatattgctgctattggtgacatagtagacggcactgatacaacccatgatttcaacttt
ttctctcttgtttatgaatggcctaaagatctattgacgcgactggtgtttgatcgaagt
agcacagatgcggctgcaaaagtcgctgaggtcatgtctgctgattttgttcatgaagta
atatctgcgtgtgttcccccagtttatcctccacgttctggtcatggatgggcttgtatt
cccgtcattccaaccactacatattctcactcagaaagtaaagtgatgtctccttcaaaa
gaggctaaacccaactgttatgtccgttcctcagcaacacctggtgtccctctgtatcct
cttcaattggatgttatcagacgtttggttaaaatatccccagtacgagcagttttagct
tgcgtatttggtgggagcatattgtacaatggcagtgattctgtcatctcgagctccttg
aacgatgagttcacaagttctcctgatgcagacagattattttatgaattttctcttgat
cagtctgagaggtttcccactttaaaccgatggatacaaatgcagaccaaccttcatcga
gtttctgaatttgttgtgacacctaagcaaaaacctgatgacgcgcggattaaaactgat
gaaagaactgcgatcaagagacttcgtgaacatgacagtgactcggaatcggatgccgaa
gaggctttttccaacaatattcgaccagcattgacacactacagtgctcgtgatggtgga
tcctttgaaactggagctagtagaactgatcctacagttttcctttcttttgattgggag
aatgaaggaccatacgaaactgctgtaaatagattaattgatgaaggaaaactaatggat
gcgttagcactttcggaccgcttcttgcggaatggggcttccgattggttacttgagctc
ctaatcaaaagtagcgaagaaactccttcaacattgggacgatctcagggatatggaagt
cagaggatctggagcaacagttggcagtattgcctgcgactaaaggataaacagctggca
gtgacactcgctcttaagtatatggatacgtgggagcttgatgcagctttaaatgttctt
acaatgtgtagttgtcatctcttagaaagcgatccagttagctatgaggtgttacatagg
agaaaagctctgcagaagtacagccacatactttctgcagatgatcgccataatagctgg
caagaggtagaagccgaatgtaaagaagaccctgaaggcttggctttaagattggctggg
aaaggagctgtttcagctgctctggaagttgctgaaagtgcagaattatcaatagatctt
agaagagaattacaaggacgacagcttgtaaagcttctaaccactgatccactcaatggt
ggtggtcctgcagaagcgtctcgatttctttcttcacttcaagactccgctgatgcacta
ccagtggtgatgggtgcaatgcagttattacctgaccttcgttcaaaacagctcctggtc
catttctttctgaagcgaagagatagcaatctgtcggatctggaagtgtcccggcttaac
tcctgggctttaggtctgaaagtgttagctgcattgccacttccttggcaacagagatgc
tcttcgcttcatgagcatcctcatttaatattagaagctctgctgatgaggaaacagtta
caatatgcctcactgatactcagagagttcccagcattaagagataacaatgttatcatg
gcctatgcagcaaaagctattgctgttatagttagcccaccgcccagagaacctcgaata
actgtgtctgcatcacggttaaggcaaaagcaaagggcagggccagcaaaaccatccttc
actagtagtttaagcaattttcagagagaggcccgaagagcattttcatggggaccacgt
aatgctgaaaacaggacgacgtcaaaggatgttcgtaaaagaaagagttccgggcttggg
gcacctgagagagctgcttgggaggcgatgacaggtattcaagaggaccagggatcatct
ttttcagcagatgggcaagatagactaccttctgtttccattgcagaagaatggatgtta
actggcgaaacaaccaaagatgaagctgtacgtgcatctcacaaatatgaaagcaccccc
gatattgttctcttcaaggctctgctatcactttgttctgatgagctagtatcagcaaga
actgcaattgaattatgcatcaaccaaatgaagaacgtattgaactccaagaagttatca
gaggctgcatctgttgaaacaattggtcgagcatatcatgcaacggaggcatttgtgcag
ggtttaacttatgcgaaatcattgctgagaaagcttctaggtgcctctgaatttaccaat
aacaacggtgatagaaatagagatcttgatgatatatcttctgatactggcagctccagt
gttggcagtcaatcaacggacgaaccatccgaagttctctcacttgcagaaatttggctg
gggcgtgctgagttgctccaaagtctcctagggtctggaatttctgcttctcttgatgac
attgctgataaattgtcatcggaatctctacgagaccgattagtatctgatgaacggtat
agtatggccgtttatatgtgcaagaaatgcaagatcgatgtttttcctgtgtggaaagca
tggggtcttgctttgttgcggatggagcgctatgcccaagctcgagtcaaattcaagcaa
gcctttcaattaaagggggaagacattcctgatgtcattcaggagataataaatacaata
gagggaggaccgcctgtggacgtgtcaactgttcgttccatgtatgaccatctggctaaa
agcgcgccaacaattttggacgattctttatcagcagactcgtacctaaatgttctgcat
atgccatcgacattccctcgttcagaaagatcaaggagatccctagaatcagaaaagaat
aattctctaccaggttcagactttgaagatgggccccgaagcaacttggatagtactcgc
tactctgagtgcaccaactacttgcaggagcattctcgccaaaaccttcttggttttatg
ttccggcacggccactttaaagatgcatgcattttattctttccaccaagtgctcttccc
cctcctttgcaaagtttatctctgggcgcagtcagttcgtcttcttcacctcaacgaaca
gatccattggcaaccgagtatggtaccattgaaactttgtgcgagttttgtgttggttat
ggagctatatcatccctcgaggaagtaatcacagaaagacttgactccgcaaagcatcaa
gatcaagccataaaccagtacatagctggagctctttcacgtatttgtgccttcttagag
acaaaccggcatttcaattacctatacaagtttctggtactcaagaaggattatgtcacc
tctgggtattgctgtattcagctttttatgaattctaccactcaggaggaagctgtaagg
catcttgagcatgcaaaggcacactttgaagaagcattgacagcgcgtcatagaggttca
gactcgaaaaaacttgttataaagggcgttagaggcaaaggtgtcaatgagaagctgagt
gaagaagctctggttacgttgtcctctcgggttaaaatgcagattgatgtggtaaagtcc
ttcagcgattctgaaggagcaccatggaagctttccttgtttggaaatccaaatgattca
gagacatccaggagaagatgtgaaatagtggagactcttgttgagaaaaactttgacttg
gcttttcaagttatatatgaatttaagctctcagctgttgatatatatgctggtgttgct
gcatcactcgccgataggaagaaaggcagtcagttgacagaactattcaaaaacatcaaa
ggaacgatccaagatgatgactgggatcaggtcctgggtgctgccatcaatgtatatgcc
aacaagcacaaagagcgccctgaccgtctcatagacatgttaacaagcagccatcgaaag
gtgctggcttgcgtggtatgtggccgcctgaaaagggcgttccagattgcgtccaaaagc
ggtaatgtggctgatgttcaatatgtagctcatcaagcctcacatgccaattcgcacact
gtactcggtatgtgcaagcaatggctatctcaaaacatgtaa
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integrated database retrieval system
