Raphanus sativus (radish): 108848554
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Entry
108848554 CDS
T06014
Name
(RefSeq) ABC transporter B family member 15
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108848554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108848554
04147 Exosome [BR:
rsz04147
]
108848554
04090 CD molecules [BR:
rsz04090
]
108848554
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108848554
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108848554
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108848554
CD molecules [BR:
rsz04090
]
Proteins
108848554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_21
ABC_ATPase
AAA_30
AAA_16
RsgA_GTPase
AAA_15
AAA_23
Zeta_toxin
AAA
AAA_28
nSTAND1
DUF87
YobI-ATPase
DLIC
Motif
Other DBs
NCBI-GeneID:
108848554
NCBI-ProteinID:
XP_018477447
UniProt:
A0A6J0MYA6
LinkDB
All DBs
Position
4:12762368..12768998
Genome browser
AA seq
1244 aa
AA seq
DB search
MGELEGKETGKKTMKSFRSIRSIFMHADGVDWVLMGLGFIGAVGDGFTTPLVLLITSKLM
NNLGGSSFNNETFMPSISKNAVALLYVACGSWVVCFLEGYCWTRTGERQTARMREKYLRA
VLRQDVGYFDLHVTSTSDVITSVSSDSFVIQDVLSEKLPNFLMSASMFVGSYIVGFILLW
KLAIVGLPFVVLLVIPGLMYGRALISISSKIREEYNEAGFVAEQAISSVRTVYAFSGERK
TISKFSTALQGSVKLGIRQGLAKGITIGSNGITFAMWGFMSWYGSRMVMYHGAQGGTVFA
VAAAVAIGGVSLGGGLSNLKYFFEAASVGERIMEVINRVPKIDSNNPEGQKLEKVRGEVE
FKHVKFVYPSRPETSIFEDFCLRVPSGKTVALVGGSGSGKSTVISLLQRFYDPVAGEILI
DGVSIDKLQVKWLRSQMGLVSQEPALFATSIKENILFGKEDATMDDVVEAAKASNAHNFI
SQLPNGYETQVGERGVQMSGGQKQRIAIARAIIKSPTILLLDEATSALDSESERVVQEAL
ENASIGRTTILIAHRLSTIRNADVISVVQHGHVVETGSHDELMENVDGQYASLVRLQQIE
KDDSSVNMKVNVQTGPILDPTKDLRSCSRVSTLSRSSSSNSVTGSSNVKNLAKDDKPPLP
SFKRLLAMNLPEWKQALYGCISATLFGAIQPVYAYSLGSMVSVYFLTSHDEIKEKTRIYA
LSFVGLAVVSFLINISQHYNFAYMGEYLTKRIRERMLSKVLTFEVGWFDRDENSSGSICS
RLAKDANVVRSLVGDRMALLVQTISAVTIACTMGLVIAWRLALVMIAVQPLIIVCFYTRR
VLLKSMSKKAIKAQDESSKLAAEAVSNVRTITAFSSQERIMKMLEKAQENPRRESIRQSW
FAGIGLAMSQSLTSCTWALDFWYGGRLIQDGYITAKALFETFMILVSTGRVIADAGSMTT
DLAKGSDAVGSVFAVLDRYTSIDPEDPDGYEPERLTGRVEFVNVDFSYPTRPAVMIFSDF
SIDIDAAKSTAIVGPSGSGKSTVIGLIERFYDPIKGIVKIDGRDLRSYNLRSLRQHIALV
SQEPTLFAGTIRENIVYGRASDKIDESEIIEAARAANAHDFITSLTDGYDTYCGDRGVQL
SGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSERVVQDALERVMVGRTSVVIAHRLST
IQNCDAIAVLDKGKLVERGTHSSLLAKGSSGVYFSLVGLQRTTC
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaattagaggggaaagagactgggaagaagacgatgaagagttttagaagcata
agatcgatattcatgcacgctgacggtgtagattgggtgctgatgggattgggatttatt
ggagctgtcggtgatggcttcacaactcctcttgttcttctcatcaccagcaagctcatg
aacaaccttggtggttcctctttcaacaatgaaactttcatgccaagcatctccaagaat
gctgtcgctttgctctatgtggcttgtggatcttgggttgtttgtttccttgaaggatat
tgttggacacgaacaggggagagacaaacagcaagaatgagagaaaaatatctaagagca
gtgctaagacaagatgtggggtactttgatcttcatgtcacaagcacttctgatgttatc
acaagtgtctctagtgacagcttcgttattcaagacgtgcttagtgaaaagttaccaaat
tttttgatgagtgcatcaatgttcgttggaagctacatagttggctttattttgctatgg
aaactcgccatagttggcttacccttcgttgtcctcttagtgatcccgggacttatgtac
ggtcgagcccttataagcatttctagcaagatacgcgaagagtacaatgaggctggtttt
gtagctgagcaggccatctcttctgtgcgaaccgtctatgcgttttcaggggagaggaag
actatttctaagttttcaacagcgcttcagggctcggtgaagctagggattagacaaggg
cttgctaaaggaatcacaatcggaagcaatggaatcactttcgccatgtgggggttcatg
tcttggtatggaagccggatggtcatgtaccatggtgctcaaggtggtaccgtatttgca
gtagccgctgctgttgctatcggtggcgtatcacttggtggtggtttgtctaacctcaag
tacttcttcgaggcggcttcagttggcgagcgaatcatggaagtaataaacagagttccc
aaaattgattcaaacaatccggaagggcaaaaactagagaaagtcagaggagaggttgag
tttaagcatgtgaagtttgtatatccatcaagacctgaaacatccatctttgaagatttt
tgtctgagagttccgtccgggaaaaccgtagctctggtgggaggaagcgggtcaggaaaa
tcaactgtgatatcgcttttgcagaggttttatgacccggttgcaggagagattctcata
gatggtgtatccattgataagctgcaagtgaagtggctaaggtcgcaaatgggtttagtt
agccaagagcctgcccttttcgccacatccataaaggagaacatattgtttggtaaagaa
gatgcaacaatggatgatgttgtggaagctgccaaggcctctaatgctcataatttcatt
tctcagttacctaatggctatgaaactcaggttggagagaggggagtgcaaatgtcagga
ggacagaagcagaggatcgcaattgcacgtgcaataatcaagtcaccaacaattctcctt
ctagatgaggcaacaagtgcattagactctgaatctgaaagagtagtccaagaagcctta
gagaatgcatcaatcggtcgtacaactatcctaattgcccaccgtctctccaccattcgt
aacgctgatgttatctccgtggtccaacatggccatgttgttgagactggctcacacgat
gagctaatggagaatgtagatggtcaatacgcttcattagtccgcttacaacagattgaa
aaagacgactcaagtgtgaacatgaaagtcaatgtacaaacgggtccaatcttggatcct
acaaaagacttgagaagttgttcaagagtctcgacacttagccggtcaagctctagtaac
tcggttacaggttcgagtaatgtcaagaatcttgctaaagatgataagccacctttacca
tcttttaagagactcttggcaatgaatctaccggaatggaaacaagcgttatatggttgc
ataagcgcaacattatttggtgccatacagccggtgtatgcatattctttagggtcgatg
gtatcagtttatttcctgacgagtcacgacgagattaaggagaaaacgaggatctatgca
ttatcttttgtcggcttagccgtggtttctttcttgatcaacatcagccaacactacaat
ttcgcatacatgggcgaatacttgactaagcgcatcagagaacggatgctctctaaggtg
ttaacctttgaagtcggttggttcgatagagatgagaactcgagcggttccatttgctct
agacttgcaaaagatgctaatgtggtgagatcgttggttggtgatcgcatggcgttattg
gtacagaccatatcagctgtgaccatagcatgcacgatgggtttggtcattgcgtggagg
ttagccctcgtgatgatcgcggtgcaaccgctgattattgtttgcttctacacccgccgt
gttctactcaagagcatgtcgaaaaaggcaatcaaggctcaggacgagagtagcaaacta
gcagcggaggctgtttccaacgtccgaaccatcacggccttttcgtcacaagaacgtatc
atgaaaatgttagaaaaggctcaagaaaacccacggcgagaaagcatacgtcagtcatgg
ttcgcagggataggactcgccatgtcgcagagcctcacgtcatgcacgtgggctttggac
ttctggtacggtggtagattgatccaagatgggtacatcacggctaaagctttgttcgaa
acgtttatgatcttggttagtaccggtcgggttattgccgatgctggtagcatgacaacg
gatcttgccaaaggctcagacgcggtcgggtcggttttcgctgtgttggaccggtacact
tcgattgacccggaggatccagatggatatgaaccggaaagactaaccggccgggtcgag
tttgtcaatgtggatttctcatacccaactagaccggctgtgatgatatttagtgacttc
tcgatagatatcgacgcagcgaagtctactgctatagttggtccaagcgggtcaggtaaa
tccacggtaatcggtttaatcgaacggttttacgacccgattaaaggcattgtgaaaatc
gacggtcgagatttaagatcgtacaatctgagatcactccgacaacacatagctttggtt
agccaagagccaacgttgttcgcgggaacgatccgagagaacatcgtatacggaagagcg
tcggataaaatcgacgaatcagagatcatcgaggcggctagagcagcgaacgctcacgat
ttcatcacgtcgttaacggacggctacgacacgtattgcggagacagaggtgtacagtta
tccggtggtcaaaaacagaggatcgcgatcgctcgagcggttttgaagaacccgtcggtg
ttgctactcgacgaagcgacgagcgctttggacagccaatcggagcgtgtggttcaagac
gcgctggagcgcgtgatggtggggaggacgagcgttgtgatcgcgcataggctgagcacg
attcagaactgcgacgcgatcgctgttttggataaagggaaactcgtggagcgcgggacc
cactcgtccttgttggcaaaaggatcgtcaggtgtttacttctcattggtcggtcttcag
agaacaacttgttga
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integrated database retrieval system
