Raphanus sativus (radish): 108849998
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Entry
108849998 CDS
T06014
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108849998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108849998
04147 Exosome [BR:
rsz04147
]
108849998
04090 CD molecules [BR:
rsz04090
]
108849998
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108849998
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108849998
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108849998
CD molecules [BR:
rsz04090
]
Proteins
108849998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
Zeta_toxin
AAA_16
AAA_29
AAA_22
RsgA_GTPase
AAA_21
AAA_15
DUF87
AAA_7
DUF815
SbcC_Walker_B
Gtr1_RagA
AAA_19
APS_kinase
DUF2714
nSTAND1
Motif
Other DBs
NCBI-GeneID:
108849998
NCBI-ProteinID:
XP_056863647
UniProt:
A0A9W3DIN0
LinkDB
All DBs
Position
4:4106800..4110890
Genome browser
AA seq
968 aa
AA seq
DB search
MLASHSLPCSTLSSLACIHYLACLLYTFPLYLFCITNSLSSCSCRSLGQAAPDVSAFVRA
KAAAHPIFQMIERDTAAKTSAKSGRKLSKVDGHIQFTDVTFSYPSRPEVVIFDKLNLAIP
AGKTVALVGGSGSGKSTVISLIERFYEPTSGAVLLDGNDIKELDIKWLRGKIGLVNQEPA
LFATTIRENIIYGKDDASDEELGRAAKLSEAFSFINNLPEGFETQVGERGIQLSGGQKQR
IAISRAIVKNPSILLLDEATSALDAESEKSVQEALERLMVERTTVVVAHRLSTIRNADII
AVVREGKIVEFGDHENLMSNPDGAYSALLRLQEADSLEGNPSLERTLSRPHRELSRTSSC
SEKESVTREDGEDQSKEAKVTMRRLYSMIRPDWIYGICGTLCAFIAGSLMPLFALGVSHS
LVSYYEKGWDNTQKEVKKIAILFCLASAITLTVYTIEHLCFGIMGERLTRRVREKMFLAI
LKNEMGWFDEVDNTSSMLASRLESDATLLKTIVVDRSTILLQNLGLVVTSFVISFMLNWR
LTLVVLATYPLVISGHICEKLFMQGYGGNLSKAYLKANMLAGESVSNIRTVAAFCAEEKV
LELYSKELLEPSKRSFRRGQIAGLFYGISQFFIFSSYGLALWYGSTLMDKNISSFKSVMI
TFMVLIVTALAMGETLALAPDLLKGHQMITSVFEILDRKSQLVGETSEQLTSVEGTIEFK
GVHFSYPSRPHVVIFKDFDLLVRSGQSMALVGQSGSGKSSVISLILRFYDPNAGTIMIEG
KDIKKLDLKALRKHVGLVQQEPVLFATTIYQNILYGNEEASHSEVIESAMFANAHSFITS
LPEGYNTKVGERGVQMSGGQRQRIAIARAILRNPEILLLDEATSALDIESERVVQQALDR
LMTNRTTVVIAHRLSTIKNADTISVLHGGKIVQQGSHRWLVLNKVGPYFNLFNLQQQQPA
ATTSLNTI
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgagtcattcactaccatgctcaacgttgtcatcgctggcctgtatacactat
cttgcttgcttgctatacacgtttcctttgtatcttttctgtatcacaaactctttgtcc
tcgtgttcgtgtaggtcacttggacaggcagcgccggatgtttccgcgttcgtacgagcc
aaagctgctgcgcatccaatttttcagatgattgaacgtgacaccgcggctaaaacaagc
gcaaaatcaggacgtaagctcagcaaagtagacggtcacattcaattcacggacgtgact
tttagctacccatctcgccctgaagtggtgatctttgacaagctaaacctagccatccct
gccgggaaaaccgtggcgcttgttggaggaagcgggtcagggaagagcacggtcatatcc
ttgatagagcggttctacgagcccacctccggagctgtgttgctagatgggaacgatatc
aaagagctggatattaagtggttaaggggaaagattgggttggttaatcaagaaccagct
ctgtttgctacaacgattcgggagaacattatctatggcaaagatgacgcgtcggatgaa
gagcttggccgtgctgctaagctctcggaagccttttcatttatcaacaaccttcctgaa
ggatttgagactcaggttggagagagggggattcaactttccggtggacagaaacagagg
attgcgatatcaagagcaatcgtgaagaatccatcgatactcttactcgacgaggcaaca
agtgctctagatgcagagtcagagaagagcgtgcaagaagcattggagcgactgatggtt
gaaagaacaacggtagtggtggctcacagactctcaaccataagaaatgctgacatcata
gcagttgttcgcgaagggaagatcgtagagtttggagatcacgagaatctcatgtctaat
cctgatggagcctactctgctctccttcgtctacaagaagctgactccttggagggtaac
ccttccttggaacgcacgttaagcaggccacatagggaactatcaagaacgagctcctgc
tcggagaaggaatcagtaactcgagaggacggtgaagatcagtccaaagaggctaaagta
acgatgagacgtctttattctatgattcgccccgactggatatacggtatttgtggaacg
ttatgtgcctttattgctggatctctgatgcctcttttcgcgcttggagtctcgcactcc
ttagtttcctattacgagaagggttgggacaatactcaaaaagaggtcaagaagatcgct
atcctcttctgcctcgcttcagccatcaccctcactgtctacactattgagcatctttgt
ttcggtattatgggcgagcgtctcacacgccgtgtccgtgaaaagatgttcttagcgatc
ttgaagaacgaaatgggttggtttgatgaggtggacaacacgagctccatgttagcgtca
cggcttgagagcgacgcgacattgcttaagaccatagtggtcgataggtcaacgattcta
ctacagaacttaggtctcgttgtgacgtctttcgtcatttccttcatgctcaactggcgt
ctcactctagtcgtattggccacgtacccattggttataagcggacatatctgcgagaaa
cttttcatgcaaggctacggaggaaacttgagcaaagcgtatctgaaggccaacatgttg
gccggagaatctgttagcaacatccgcaccgttgccgccttctgtgctgaggagaaggtt
ctagaactttactcaaaagagcttttagaaccttctaaacgctctttcaggcgtggacaa
atagctggactgttctacggcatctctcagttctttattttctcctcctatggcctcgct
ctctggtacggatcaactttgatggataaaaatatatcgagctttaagtcagtgatgata
acattcatggttttgatcgtgacggcgttagcgatgggtgaaacattagctctagctcct
gatctgctgaaaggacaccagatgattacgtctgtattcgagatcttggaccgtaagtct
cagcttgttggagaaaccagcgagcagctgactagtgtggaaggcacgattgagttcaaa
ggcgtccacttcagctacccttcaagaccacacgttgtaattttcaaggactttgatctg
ctagttcggtccggacagagcatggcgcttgtcggacagagtgggtccgggaaaagttcg
gttatttcactcattctccggttctatgacccgaacgcaggaacaatcatgatagaggga
aaagacatcaagaaactagatttgaaagcactgaggaagcatgttggtctggttcagcaa
gagccagtgcttttcgcaacgacaatctaccagaacattctgtacggaaacgaagaagct
tctcactctgaagttatagagtcagctatgttcgcaaacgctcacagcttcatcacctct
ctcccggaaggttacaatactaaagtaggtgaacgaggcgttcagatgtcaggcggtcag
cgacagaggatcgctatcgctagagccatcctcaggaatccagagatcctgctccttgac
gaagccactagcgctttggacattgaatctgagcgtgtggtacaacaagcattggatcgg
ttaatgacaaaccgaacaacggtggtgatagctcaccggttatcaacgatcaagaacgct
gatacaataagtgtattacatggaggaaaaatcgtacagcaaggcagccaccgttggcta
gttcttaacaaggttggtccgtattttaacctcttcaatcttcagcagcagcagccagca
gcaacaacatccttaaatactatatag
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