Raphanus sativus (radish): 108852523
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Entry
108852523 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108852523
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108852523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsz03019
]
108852523
Enzymes [BR:
rsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
108852523
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
108852523
Messenger RNA biogenesis [BR:
rsz03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
108852523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Y_phosphatase
DNA_ligase_A_M
Y_phosphatase3
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
108852523
NCBI-ProteinID:
XP_018481530
UniProt:
A0A6J0NAI3
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Position
4:11323191..11325458
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AA seq
638 aa
AA seq
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MITTTMHSEESGRGSSYLPRKRHLENPTEEQSKRSRLYHPRDQYQNTNSVIPHGWLDCPR
FGHEIASIIIPSKVPLSESYNDYLPPDKRYTFKQLLTNGKRNKLGLVIDLTNTTRYYNPS
TELKREGIKYVKIRCSGRDSVPDNVSVNTFVHEVNQFERNNFSKKSVLVHCTHGHNRTGF
MVVHYLMRSRPLMSVTQALKTFNDARPPGIYKADYIDALYSFYHETKPESTLCPQTPEWK
RMSENESLSLSPRVPSSVEEEVIVKKMSNDDVLGDEIPYGQEKCYQEFCYKMMNVKMEGR
VQFPGSHPVSLDREGFQLLRQRYYYATWKADGTRYMMLLTREGCFLIDRNFRFRRVQMRF
PCRPHEPRVHDYTLLDGEMVVDNFLDGQGKPCQARRYLVYDMVAVNGQSVSELPFSERWS
VIDREVIRPRNDEKQKKVTTNINGYRYEMEPFGVRIKAFCLLSSVEKKVFNELIPSLSHE
SDGIILQGWDDPYVYQRNEGLFKWKFLDTIDFLFEVGRDGRYMLFLLDNGRNRLMEGHKV
EFRGDGWDEAVSYSGKLLECFWDKEDRVWVPMRVRVDKSQPNGMKTFRGVMKSINDDITK
EVLLEEIKEIIRLPMYVERIRVDTQAAERRRHGNRKGL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgattactactacgatgcactcagaagaatcaggaagaggtagtagttacttgccccgc
aagcgacatctcgaaaaccctactgaagaacagagcaaaagatcgagactttaccaccct
cgcgatcaataccaaaacactaactctgttatccctcacggttggctagactgtcctcgt
ttcggacacgagatcgcttccatcatcatcccctcaaaagtccctctcagcgagtcttac
aacgactatctccctcccgacaaaagatacactttcaaacagctgttaactaacggcaaa
aggaacaagctcggtctcgtgatcgatctcaccaacacgactcgctactacaaccctagc
acagagctaaagagggaagggatcaagtacgttaagattcgctgcagcggtcgtgactct
gtccccgataacgtctctgtgaacacattcgtccacgaggtgaatcagtttgagagaaat
aacttctctaagaaatctgttctcgttcactgtacgcatggtcataaccgtacagggttc
atggttgttcattaccttatgaggtctaggcccttgatgagcgttacacaggccttgaaa
acgtttaacgacgctcgtcccccaggaatctataaagcggattacatcgatgctctttac
agtttctatcacgaaacaaagccagagagtactttatgcccacagactcctgagtggaag
aggatgtctgagaacgagtctttatctttatcaccgcgtgtcccttcttcagtggaagag
gaagtgatagttaagaagatgtcaaacgatgacgttttgggagatgagataccttacggt
caagagaagtgttaccaggagttttgttacaagatgatgaacgtcaagatggaagggaga
gtgcagttccccggctcgcatcctgtgtctttagacagggaagggttccagctcctgagg
cagaggtactattacgccacgtggaaggcagacgggacgcgttacatgatgctcttgact
agggaagggtgtttcttgatagacaggaactttaggttcagaagagtgcagatgcggttc
ccttgcaggcctcacgagcctagagtgcatgactacactctgctcgacggagagatggtt
gtggataactttcttgatggacaaggaaagccttgccaggcgaggaggtacctcgtgtac
gacatggtagcagtcaacggccaatcggtctcggagctacctttcagtgaaagatggagt
gttatcgatagagaagtgatcagaccacgcaacgatgagaagcagaagaaggtcacaaca
aacattaacgggtacagatacgagatggagccttttggtgtacgtataaaggccttttgc
ttgctctcttccgtggagaagaaggtgttcaacgagctgataccttcgctctcccacgag
tccgatgggatcatactccaaggctgggacgatccttacgtttaccagaggaacgaaggc
ttgttcaagtggaagtttctagacactatcgactttttgttcgaggtggggagagacggg
cgttacatgctgttcttgttagataacgggaggaacaggcttatggagggacacaaggtt
gagtttagaggcgacggttgggacgaggcggtgagttacagtgggaagcttttggagtgt
ttttgggataaagaggatagagtatgggtgcctatgagggttagagttgataagtctcag
ccgaatggtatgaaaacgtttcgtggcgtgatgaaatctattaatgatgatataactaag
gaggttttgctggaggagattaaagagattattcggcttcctatgtacgttgagcgtatt
cgtgtggatactcaagctgctgaacggcgcagacatgggaaccgcaaggggttatga
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