Raphanus sativus (radish): 108854443
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Entry
108854443 CDS
T06014
Name
(RefSeq) ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108854443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsz02000
]
108854443
04147 Exosome [BR:
rsz04147
]
108854443
04090 CD molecules [BR:
rsz04090
]
108854443
Enzymes [BR:
rsz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108854443
Transporters [BR:
rsz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108854443
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108854443
CD molecules [BR:
rsz04090
]
Proteins
108854443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA_29
Zeta_toxin
AAA_15
AAA_30
nSTAND1
DUF87
AAA_23
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
108854443
NCBI-ProteinID:
XP_018483510
UniProt:
A0A6J0NG27
LinkDB
All DBs
Position
4:12561513..12568257
Genome browser
AA seq
1252 aa
AA seq
DB search
MSETTTDAKPVPPAEAEKKKEESLPFFKLFSFADKFDYLLMITGTLGAIVHGSSMPVFFL
LFGEMVNGFGKNQMDLHQMTHEVSRYALYFVYLGLVVCFSSYAEIACWMYSGERQVAALR
KKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVG
FVSAWRLALLSVAVIPGIAFAGGLYAYTLTGITSKSRESYANAGVIAEQAIAQVRTVYSY
VGESKALSSYSDAIQYTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRSGTTD
GGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGFKLMEIINQRPTIIQDPLDGKCLDQ
VRGDIEFKDVTFSYPSRPDVIIFRNFSIFFPSGKTVAVVGGSGSGKSTVVSLIERFYDPN
NGQILLDGVEIKTLQLKFLREQIGLVNQEPALFATTILENILYGKPDATMVEVEAAASAA
NAHSFITLLPKGYETQVGERGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDASSES
IVQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAKAGAYASLIR
FQEMVGTRDFSNPSTRRTRSTRLSHSLSTKSLSLRSGSLRNLSYSYSTGADGRIEMISNA
ETDRKTRAPQNYFYRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYTDY
DLMERKTKEYVFIYIGAGIYAVIAYLIQHYFFSIMGENLTTRVRRMMLSAILRNEVGWFD
EDEHNSSLIAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATF
PLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQSKILSLFCHELR
VPQKRSFYRSQTSGFLFGLSQLALYGSEALILWYGAHLVSEGKSTFSRVIKVFVVLVITA
NSVAETVSLAPEIIRGGEAVGSVFSVLDRQTRIDPDDADADPVETIRGDIDFRHVDFAYP
SRPDVMVFRDFNLRIRAGHSQALVGASGSGKSSVIAMIERFYDPLSGKVMIDGKDIRRLN
LKSLRLKIGLVQQEPALFAATIFDNIAYGKDGATESEVIEAARAANAHGFISGLPEGYQT
PVGERGVQLSGGQKQRIAIARAVLKNPTVLLLDEATSALDAESECVLQEALERLMRGRTT
VVVAHRLSTIRGVDSIGVIQDGRIVEQGSHSELVSRPEGAYSRLLQLQTHRI
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacaacaacggatgcgaagccggttccaccagcggaagccgagaagaagaaa
gaagagagcttaccgttcttcaaactcttctccttcgcagataaattcgattacctcttg
atgatcaccggcactctcggcgccatcgtccatggctcatccatgcctgtcttcttcttg
ctcttcggtgaaatggttaacggattcggcaaaaaccagatggatttacaccaaatgaca
catgaagtctccagatatgctctgtacttcgtctacttgggtttggtcgtttgcttctct
tcatacgcagagattgcatgttggatgtactctggagaaagacaagtagctgcgttgagg
aagaagtatctcgaagctgttctgaaacaagacgttggtttcttcgacaccgatgcaaga
accggtgacattgtcttcagcgtctctaccgatactcttcttgttcaagacgccattagc
gagaaggttgggaactttatacattacctgtcgacgttcttggcggggcttgtggttggg
tttgtgtcagcatggagattagctttgttgagtgtggcggtgattcccggaatcgctttc
gccggcggtttatacgcttatacgctcaccggaatcacttccaagagccgcgaatcttat
gctaacgctggcgttatagccgagcaggcaattgctcaagttcgaactgtttactcttat
gttggagagagcaaggccctgagctcgtattctgatgccattcagtacacgcttaagctt
ggttacaaagctgggatggctaaaggattgggtttaggatgtacttatgggatagcttgt
atgtcatgggctcttgtgttttggtacgctggcgttttcatccggagtggaacaaccgat
ggaggaaaggcattcactgctatcttctctgccattgttggtggaatgagtttgggacag
tctttctccaatcttggggcgtttagtaaaggtaaagctgctggttttaagttgatggag
attataaaccagagaccgacgataatccaagacccgttggatgggaaatgcttggaccaa
gttcgtggagacattgagtttaaagatgtgacctttagctatccttcacgtcctgatgtt
atcatcttcagaaacttctctattttcttcccttctgggaaaactgtggctgtggttggt
ggtagtggctctgggaagagtactgttgtttccctcatagaaagattctacgatccaaac
aacgggcagattctgttggatggtgttgagataaagacgcttcagttgaagtttttgcgt
gaacaaatcgggcttgtgaatcaggaacctgcgctcttcgccacaaccatactagagaac
atactctatggtaaaccagatgcaacgatggttgaagttgaagcagctgcttctgctgcc
aacgcgcatagcttcattacgttgcttcctaaaggctacgaaacacaggttggagaaaga
ggtgttcaactctcaggtgggcagaagcagagaatagcaattgctagggcgatgttgaaa
gatccaaagattcttttactagatgaagctacaagcgctctagatgctagctctgagagc
attgttcaggaagctttagacagagtcatggtggggaggaccaccgtggttgttgctcat
cgtctctgcaccataagaaacgttgactccattgctgtgatacagcaaggccaagttgtt
gaaaccggaacacacgaagaactcattgccaaagccggtgcttacgcatccctcatcagg
tttcaagagatggttggcactcgagacttctcaaacccgtctacacgtcgcacccgttcc
acccgtttgagccactccctgtcgacgaaatcactcagcttgagatcaggaagtttgagg
aacctgagctactcgtacagcactggagcggatggtcggatagagatgatctcaaatgca
gagacggatagaaagactcgagctcctcaaaactacttctacaggcttctcaagcttaat
gcaccggaatggccttactcaatcatgggagcagttggctcggttctttctggtttcatt
ggtccaacgtttgccattgtcatgagtaatatgatagaagtcttctactacactgactat
gatttaatggagaggaaaacaaaagagtatgtgttcatctacataggtgctggtatctat
gcagtgatcgcctatttgatccaacattacttctttagcatcatgggagaaaacctcacg
acaagagtaagaagaatgatgctctcagctatcttgaggaatgaggttggttggttcgac
gaggatgaacacaactcgagcctgatagctgcacggttagccactgatgcagcagatgtt
aaatctgccatagccgagagaatctcagtgatactgcaaaacatgacttcacttctcaca
tccttcattgttgccttcatagtagagtggagagtttctcttctcatcttagccacgttc
ccacttctagttcttgccaactttgctcagcaactatctctgaagggttttgcgggagac
acagccaaggctcatgcaaagacttcaatgattgctggtgaaggagtcagcaacattaga
accgtagcagccttcaatgcacaaagcaagatcctctctctgttctgtcacgaactccgt
gtccctcagaaaagaagcttctacagaagtcaaacctcgggtttcctctttggcctctct
cagcttgctctctatggatccgaggctctaatcctctggtacggtgcccaccttgtgagt
gaaggcaagtcaaccttctccagagtgattaaagtctttgtggttttggtcattaccgca
aactctgttgctgaaactgtcagtcttgctcctgaaatcatccgtggaggtgaagctgtt
ggttctgttttctcggtcttagataggcaaaccaggattgacccggacgacgctgatgct
gatccggtcgagacaatccgtggagacattgattttaggcatgtggactttgcttaccct
tcaagaccggacgtcatggtgttcagagattttaacctcagaatcagagctggacatagc
caagctcttgtcggggccagtggctcggggaaaagttctgtgatcgcaatgatcgagcgg
ttttatgatcccctttccggaaaagtcatgattgacggcaaagacatccgcaggctaaac
ctaaaatccttgaggctcaaaataggtcttgttcagcaagagcctgctcttttcgcagca
accatcttcgacaacattgcatatgggaaagatggtgcgactgagtccgaggttattgag
gctgctcgagcagcaaacgctcatggtttcatcagtggtttgccggaaggttaccaaact
ccagtgggtgaaagaggagtgcagttatcaggtggacagaaacagaggattgcaatagcg
agagcagtgctcaagaaccctactgtgttgcttcttgatgaagcaacaagcgcactagat
gcggaatcggaatgcgtgctgcaggaagctttggagaggctcatgagaggccggaccacc
gtggtagttgctcaccgtttgtcgaccataagaggggttgattccattggtgtgattcaa
gatgggaggattgtggagcaaggaagccattccgagctcgttagccgaccagagggagct
tattcaaggctgttacagcttcaaacacataggatttga
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integrated database retrieval system
