Raphanus sativus (radish): 108857697
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Entry
108857697 CDS
T06014
Name
(RefSeq) phenylalanine ammonia-lyase 4 isoform X1
KO
K10775
phenylalanine ammonia-lyase [EC:
4.3.1.24
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00360
Phenylalanine metabolism
rsz00940
Phenylpropanoid biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
rsz_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
108857697
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
108857697
Enzymes [BR:
rsz01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.24 phenylalanine ammonia-lyase
108857697
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Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
108857697
NCBI-ProteinID:
XP_056842587
UniProt:
A0A9W3BTM0
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Position
5:3603592..3608909
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AA seq
704 aa
AA seq
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MELCKQNNNHIVAVSGDPLNWNAAAEALKGSHLEEVKRMVEDYRKGAVRLGGETLTIGQV
AAVASGGVMVELAEEARARVKASSDWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQK
ELIRFLNAGIFGAGVRDTSHTLPKPTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHE
ITPCIPLRGSITASGDLVPFSYIAGLLTGRPNAKAVGPTGETLTASDAFRLAGVPSFFEL
QAKEGLALVNGTGVGSGLASTVLFETNVLAVLSEVMSAMFAEVMQGKPEFTDHLTHKLKH
HPGQIEAAAIMEHILRGSSYVKEAQQLHELDPLQKPKQDRCRYALRTSPQWLGPQIEVIR
AATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNTRLAIASIGKLMFAQFS
ELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQ
DVNSLGLISSRKTEEAVDILKLMSTTYLVALCQAIDLRHLEENLKKAVKTVVSQVAKRVL
TVGANGELHPLRFTERDVFQVVDREYVFSYADDPCSFAYPLMQKLRHILVDHALEDPDAS
TSVFQKIGAFETELKLLLPSEVERVRGEYEEGCSVIDNRIKECRSYPLYRFVREELGTEL
LTGESVRSPGEEFDKVFSAICDGKVIDPLLECLEEWNGAPVPIC
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtgcaaacaaaacaacaaccacatcgtcgccgtctccggcgatccgttgaac
tggaacgcggcggcggaagctttgaaagggagccacttggaggaggtgaaacgtatggtg
gaagattatagaaaaggggcggtgcggttaggaggagagacgttgacgattggtcaagtt
gcagccgtggctagcggaggagtgatggtggagcttgcggaggaggctcgtgcccgggtt
aaggcgagtagcgactgggtgatggagagcatgaaccgtggcacggatagttatggagtc
accacagggtttggtgcaacatcccatagaagaaccaaacaaggcggtgcacttcaaaag
gagcttattaggttcttgaacgccggaatattcggcgccggcgtcagagacacgtcacac
acgctacctaagcccacaactagagcggctatgctcgttcgtgtcaacactctcctccaa
ggctactctggaatacgtttcgagattcttgaagccattacaaagcttcttaaccacgaa
atcactccatgcatccctctccgtggtagcatcaccgcatcaggcgaccttgttcccttc
tcttacatcgccggactactaaccggccgtcccaatgcaaaagccgtgggtcccaccggt
gagactctcactgcctccgatgcctttaggctcgccggagtaccgtcctttttcgagctg
caggcaaaggaagggctagcgcttgtgaacgggacaggggtcggatcgggtttggcttcg
acggttctgtttgagacgaatgttttggcggttttgtctgaagttatgtctgcgatgttc
gctgaggttatgcaagggaagcctgagtttactgatcatctaacgcataagcttaagcat
caccctggtcagattgaagcagctgcgattatggaacatatattacgcggaagctcttac
gttaaagaagctcagcagctccacgaattggatccgcttcaaaaacctaaacaagatcgc
tgcaggtacgcgctaaggacgtcaccacaatggctaggaccacagatagaggtgatcaga
gcagcgaccaagatgatagagcgtgagatcaactcggtcaacgacaaccctctcatcgac
gtctcgaggaacaaagcactacacggcggtaacttccaaggcacgccgatcggcgtcgcc
atggacaacacccgcttagccatcgcttccatcgggaaactcatgttcgcgcagttctcc
gagctggtaaacgacttctacaacaacggtctgccttcaaacctatcaggcgggagaaac
cctagcctcgactacgggttcaaaggcgcggagatagccatggcttcttactgctccgag
cttcagttcttggctaaccccgtgaccaaccacgtccagagcgcggagcagcacaaccaa
gacgttaactccctagggctgatctcgagcaggaagacagaggaggctgttgatatcctc
aagctgatgtccacgacctacttggttgcgctctgccaagccattgacctacgccatctc
gaagagaatctgaagaaagcagttaaaaccgttgtgagccaggtagcgaaacgggtgtta
acggttggtgctaacggcgagctgcatccgttaaggttcacggaacgggatgtcttccaa
gtggttgatagagagtacgtgttctcatacgcagacgatccttgcagctttgcttacccg
ttgatgcagaagcttagacacatacttgtggaccacgctttagaggatccggatgcctcc
acgtcggtttttcagaagataggagcgttcgagacggagctgaagctgcttctccctagc
gaagtggagcgtgttaggggtgagtatgaggaagggtgttcggttatagataaccggatt
aaagagtgtcggtcttatccgctgtaccggtttgtccgggaggagctggggactgagctg
cttactggagagagtgttaggtcgcctggagaagagtttgataaagtgttctcggcgatt
tgtgatgggaaggttattgatcctttgttggagtgtctcgaggagtggaacggagctccg
gttccgatctgttga
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