Raphanus sativus (radish): 108860666
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Entry
108860666 CDS
T06014
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD4 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108860666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108860666
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108860666
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108860666
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108860666
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108860666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
PH
Ank_2
BAR
Ank_3
Ank_5
Ank_4
PH_11
PH_8
PH_13
PH_20
DUF5683
Motif
Other DBs
NCBI-GeneID:
108860666
NCBI-ProteinID:
XP_018490030
UniProt:
A0A6J0P041
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Position
1:5011232..5016619
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AA seq
769 aa
AA seq
DB search
MAAFINLEDSPMFQKQVCSLEGTAEELKDRCQKLYKGVRKFMGVLGEASKGESAFADCLE
EFGAGHDDPISLSIGGPVISKFINTLRELASYKEFLCSQVEHVLLERLMNFINVDLQEAK
ESRHRFDKAAHSYDQSREKFVSLKKNTRGDIVAELEEDLENSKSTFEKSRFNLVNSLMTI
EAKKKYEFLESISAIMDAHLRYFKLGYDLLGQLEPYIHQILTYAQQSKEQSKIEQDRLAR
RIQEFRTQSELDSQQLAASAEISSVNGNRVVGTFPYKNTDTSLTADKEVIKQGYLLKRSS
SLRTDWKRKFFVLDSHGSMYYYRNNGNKSMGSQHNYSGSSDHTGVFGRFRARHNRSASLT
EGSLGYKTIDLRTCLIKLDAEDMDLRLCFRIISPQKTYTLQAENGADRMDWVNKITAAIG
TLLNSHFLQQSPVQYLDKDYAGSAPAKGVVSLDQSQHNEDVSTILRGIPGNNVCAECNAP
NPDWASLNLGVLLCIQCSGVHRNLGVHISKVRSLTLDVKVWEPTILDLFRNLGNLYCNSL
WEGLLHLDDDSENESTLPRASVSKPCPDDSFTVKEKYILAKYLEKALVIKDESKANPSAA
CRIWEAVQSRNIREIYRLIVTSGDVNIINTKFDDIITDIDAYHHHADASGEAVKKRHDPT
ACQRIKDSNEPGNCLQGCSLLHVACHIGDSVLLELLLQFGADPNMRDYHGRTPLHHCISS
GNHKFAKILLRRGARPSIEDDGGLSVLERAMEMGAITDEELFLLLAECA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttatcaatctggaagactctccaatgttccagaaacaggtttgttccttg
gaagggacagctgaagagctcaaagatcgttgtcagaagctatacaaaggtgttaggaag
tttatgggagttttgggagaagcatccaaaggagaaagtgcttttgcagattgtcttgaa
gagtttggggctggacatgatgatcccatcagtctttccattggaggccccgttatatcc
aaattcataaatacacttcgagagcttgcctcttataaggaatttctttgctcgcaggtc
gagcatgtgttacttgagaggttgatgaactttattaatgttgatctacaagaagctaag
gagtcacgccatcgatttgataaagctgctcattcctatgatcagtctcgagaaaagttt
gtatctctaaagaagaatacaagaggagatatcgttgcagagttggaagaggatctggag
aactcaaagtcaacatttgagaagagccgtttcaatctagtcaattcattgatgactatt
gaagctaagaagaagtatgagtttctggaatctataagtgcaattatggatgctcatctg
agatattttaaacttggatatgacttgctgggtcaactggaaccatatatccatcagata
ttaacatacgcccaacagtcaaaagaacagtccaagatcgaacaagatcgactagctaga
cggattcaagaattcagaacccagtctgaactagatagccaacaacttgccgccagcgca
gagatctctagcgttaacggaaaccgtgttgttggaaccttcccttataaaaataccgac
acaagtttaacagcagacaaggaagtaattaaacaggggtatttattgaagcgatcatca
agtttgagaactgattggaaaaggaagttttttgtccttgatagtcatggttccatgtac
tattacagaaacaatggcaataaatctatgggatctcagcataactatagtggttcttct
gaccatactggcgtctttggtcggtttcgtgcaagacacaatcgatcggcttctctcact
gagggcagcctaggctataagactatcgatctccgcacttgtttgattaaactggatgca
gaagacatggatcttcgtctctgtttcagaattatttctcctcagaaaacttacacactt
caggctgagaatggagcagataggatggactgggtaaacaaaatcacagcagctataggg
acacttctgaattctcattttctgcaacagtcgccagttcagtacttggataaagactac
gctggttctgctcctgctaaaggtgtcgtctccctggatcaaagtcaacataacgaggat
gtctccacaatactcagaggaattccagggaataatgtgtgtgcagagtgcaatgctcct
aatcccgattgggcatcattaaatcttggagttttgttgtgcattcaatgctctggtgtt
cacaggaacctcggggttcatatctccaaggtgcggtccctcacactagatgtgaaagtg
tgggagccaacaatcttggacctatttcgaaatttgggaaatttgtactgtaattcactg
tgggaagggctacttcaccttgacgatgacagtgaaaacgaatcaacattgccacgtgct
tcagtttcaaaaccatgtccagacgattcttttactgtcaaggagaaatacattctagcg
aagtacctggagaaagcattagtcatcaaagatgaaagcaaagccaacccttctgctgcg
tgtagaatatgggaagctgttcaaagcagaaacatacgagaaatatatcgactgatcgta
acttcaggggatgtgaatatcatcaacaccaagttcgatgacataataactgacatcgat
gcttatcatcaccatgccgacgcatcaggggaagcggtaaagaaaagacatgacccaact
gcgtgtcagaggatcaaagactccaacgaaccaggaaactgtcttcaaggctgttcattg
ctccatgtggcttgtcacatcggtgactctgtcttgcttgaactgttgctgcagtttggt
gctgacccaaacatgagagattaccacggaaggactccgttacaccactgcatctcttca
gggaaccacaagtttgcaaagattctactccgaagaggtgcacgtccatcgatagaggac
gatggaggactaagcgtgttggagagagcaatggaaatgggagccataaccgatgaagag
ctctttcttctcttagccgaatgcgcttaa
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