Raphanus sativus (radish): 108861888
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Entry
108861888 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108861888
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108861888
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108861888
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108861888
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108861888
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108861888
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108861888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
108861888
NCBI-ProteinID:
XP_018491367
UniProt:
A0A6J0P2S3
LinkDB
All DBs
Position
5:35579215..35584350
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AA seq
797 aa
AA seq
DB search
MELLRSNMSRVQIPEPTHRIYKHECCLSFDTPRSEGGLFVDMNSFLAFGKEYVAWNYEKT
RNPVYLHIKESPKSVPEDRPLKKPTLLAIGVDGGFDNNEPEYEESYSIVILPDFVSLPFP
SVELPEKVRIAVDTVLSAVGAEKREQVAAWTAEEKKVSEHALALQQLKSGVLIPPSGWKC
AKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETAYPLAVKLGTITANLEAAD
VYSYPEDDSVLDPHLAQHLAHFGIDFSSMQKTEMTTAERELDQNTNFDWNRIQESGKELV
PVFGPGYTGLVNLGNSCYLAATMQILFSTHSFISRYFSHQSLKLAFEMAPADPTLDINMQ
LTKLGHGLLSGKYSIPVAEKNVATGDVRQEGIPPRMFKSVVAAGHAEFSSMRQQDALDFF
LHLLDKVERGNNMRPDLDPTRSFKFGVEEKILCSSGKVSYNKRDDCILSLNIPLQEATNK
DELEAFNNQKSDQGSEENNMSTDEIVRPRVPLEACLAMFSSPEQIRDYYSTALKGKTTAI
KTTSLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDVIDISHMRSKGLQPGEELLPDD
VREEAMESAQPVANEEIVAQLVSMGFSQLHCQKAAINTSNTGVEDAMTWLLSHMDDPDID
APISHQTSDVDQSSVDTLISFGFAEEVARKALKASGGDIEKATDWIFNNPNASISDMDVS
SSNSAQTPAQSELPDGGGRYKLFGIVSHMGTSTHCGHYVAHIMKEGRWVIFNDSKVGIST
NPPKDMGYLYFFQRLDN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagctcctccgatcaaacatgtctagggttcagatccccgagcccactcatcgcatc
tacaagcacgagtgttgcctctccttcgacactccgagatcggaaggaggattgttcgta
gatatgaacagtttcctcgcgtttgggaaagagtacgttgcttggaactacgagaagacg
cgaaaccctgtttatttgcatattaaggagtctcccaaatctgttcccgaggatcgccct
ttgaagaagccaaccctactcgctataggagttgacggcggatttgacaacaatgagcct
gagtatgaagagtcttatagcatagtcatactccccgattttgtttcacttccattccct
tctgttgagctaccagagaaggtgaggattgcggttgatactgtgttgagtgcggttggt
gctgagaagagagagcaagttgcagcttggacagctgaggaaaagaaagttagcgagcat
gcattggcgctgcagcagttaaagagcggcgttctcattcctccctctggttggaaatgt
gccaagtgtgataagacggagaatctctggcttaatcttaccgacgggatgattctctgt
ggaaggaaaaactgggatgggactggtggaaacaaccatgcggttgagcactacaaggag
actgcctaccctcttgctgtaaagcttggaactatcacagctaacttggaagcagcagat
gtttattcctatccggaagatgacagtgttttggacccgcacctggctcagcatctggcc
cattttggaatcgacttctcctcgatgcagaagacagaaatgacaactgccgaaagagaa
cttgatcaaaatacgaattttgattggaaccgtatacaagagagtggaaaagaattggta
ccggtttttggacctggatataccggacttgtcaatcttgggaacagttgctacctggca
gctacgatgcagattcttttctcgacccattcgtttatttcaagatacttttcacatcag
agcttaaagttggcgtttgagatggctccggctgatccaactttggacatcaatatgcaa
ttaacaaagcttggacatgggttattatctgggaagtactctattcctgtagcagagaag
aatgttgcaactggagatgttagacaagaaggaatacctcctcgcatgttcaaatcggta
gttgctgcaggacatgcagaattctcttctatgagacagcaggatgctcttgactttttc
ctccatttgctagacaaagttgagcgtggcaacaacatgagaccggatttagaccccacg
aggagcttcaaatttggagtagaagaaaagatcctttgttcgtctggaaaggtctcatat
aataagagggatgactgtattctttcgttgaacattccattgcaggaggcaactaataaa
gatgaactagaagcctttaacaaccagaaatcagaccaaggatcggaagaaaataatatg
tcaactgatgaaattgtacgcccacgagttcctttagaagcttgtctagctatgttttca
tcacctgagcagattcgtgattactatagcactgctctgaaagggaagacaacagctatc
aagacaactagtttgacatctttcccagattatttggtgttgcacatgcggaagtttgtt
atggaggcaggctgggtgccaaagaaacttgatgtgtacattgatgttccagatgtaatt
gatatcagccacatgcgcagcaaagggcttcagcctggagaggaactgttgccagacgat
gttcgagaagaagcgatggaatcagcacagcctgtggcaaatgaagagatagttgcacag
cttgtctcaatgggattcagccagcttcactgccagaaagccgccataaatacttctaat
actggggtggaagatgcgatgacctggttgctttctcacatggatgatccagatatcgac
gcaccaatctcccatcagacatctgacgttgatcaatcaagcgttgataccttaatctcc
tttggatttgctgaagaggttgctcgaaaggcactcaaagcctcgggaggagatatcgag
aaagctacagattggatattcaacaaccctaatgcttctatctcggacatggacgtttcc
tcaagtaattcagcacaaacaccagctcaaagtgaattaccagacggaggaggaagatac
aagttatttgggatagtaagtcacatgggaacatcaacacactgtggtcactatgtggca
cacataatgaaagaaggccgttgggttatcttcaatgacagcaaagtaggtatctcgaca
aatcctcctaaagacatgggttacctctacttctttcagcgtctggacaattga
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